RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 PIGYQ3MUY2 71 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 SFRP4Q6FHJ7 346 aaPredicted RBP14.21□□□□□ -0.13
CMTM3-208ENST00000564247 LAX1Q8IWV1 398 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 FAM89BQ8N5H3 189 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 CHST4Q8NCG5 386 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 RAB1CQ92928 201 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 SLC25A38Q96DW6 304 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 Q96M66 194 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 OR14J1Q9UGF5 321 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 WIPI2Q9Y4P8 454 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 TANC2Q9HCD6 1990 aa14.21□□□□□ -0.13
CMTM3-208ENST00000564247 OOEPA6NGQ2 149 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 RNF223E7ERA6 249 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 C3orf80F5H4A9 247 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 GEMIN2O14893 280 aaKnown RBP14.2□□□□□ -0.14
CMTM3-208ENST00000564247 OR7C1O76099 320 aaPredicted RBP14.2□□□□□ -0.14
CMTM3-208ENST00000564247 LY6HO94772 140 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 BLVRBP30043 206 aaPredicted RBP14.2□□□□□ -0.14
CMTM3-208ENST00000564247 IKZF1Q13422 519 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF146Q15072 292 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 SPANXN2Q5MJ10 180 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 FAM201AQ5SY85 155 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 DEFB108BQ8NET1 73 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 WDFY2Q96P53 400 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 NEDD4LQ96PU5 975 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 SPACA1Q9HBV2 294 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 DCAF16Q9NXF7 216 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 RABL2AQ9UBK7 228 aaPredicted RBP14.2□□□□□ -0.14
CMTM3-208ENST00000564247 EXTL2Q9UBQ6 330 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 RABL2BQ9UNT1 228 aa14.2□□□□□ -0.14
CMTM3-208ENST00000564247 IGHV3OR15-7A0A075B7D8 119 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 FABP12A6NFH5 140 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 RFPL4AA6NLU0 287 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 OR2AT4A6NND4 320 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 RFPL4AL1F8VTS6 287 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 PPIHO43447 177 aaKnown RBP14.19□□□□□ -0.14
CMTM3-208ENST00000564247 NDUFA2O43678 99 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 RP2O75695 350 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF205O95201 554 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 HAND1O96004 215 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF44P15621 663 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 DUSP1P28562 367 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 PRDX2P32119 198 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 GABRA2P47869 451 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 PDLIM4P50479 330 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 ARL6IP1Q15041 203 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 CNIH2Q6PI25 160 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 CLEC2AQ6UVW9 174 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 Q6ZTK2 550 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 Q71RC1 249 aaPredicted RBP14.19□□□□□ -0.14
CMTM3-208ENST00000564247 OR10R2Q8NGX6 335 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 C15orf40Q8WUR7 153 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 NICN1Q9BSH3 213 aa14.19□□□□□ -0.14
CMTM3-208ENST00000564247 SEBOXQ9HB31 216 aaPredicted RBP14.19□□□□□ -0.14
CMTM3-208ENST00000564247 TRAV18A0A075B6X5 111 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 IGHV4-30-2A0A087WSY4 118 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.18□□□□□ -0.14
CMTM3-208ENST00000564247 SOCS1O15524 211 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 XRCC3O43542 346 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 FSTL3O95633 263 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 CSF3P09919 207 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 PSG2P11465 335 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 FUT3P21217 361 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 CDK2P24941 298 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 BTG1P62324 171 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 TMEM69Q5SWH9 247 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 ATAD3CQ5T2N8 411 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 METAP1DQ6UB28 335 aaPredicted RBP14.18□□□□□ -0.14
CMTM3-208ENST00000564247 BAIAP2L2Q6UXY1 529 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF525Q8N782 197 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 C19orf18Q8NEA5 215 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 OR4M1Q8NGD0 313 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 OR5T2Q8NGG2 359 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 RAB3CQ96E17 227 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 SEH1LQ96EE3 360 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 NUDT16L1Q9BRJ7 211 aaKnown RBP14.18□□□□□ -0.14
CMTM3-208ENST00000564247 PLEKHJ1Q9NW61 149 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 IL36RNQ9UBH0 155 aa14.18□□□□□ -0.14
CMTM3-208ENST00000564247 MRPS7Q9Y2R9 242 aaKnown RBP14.18□□□□□ -0.14
CMTM3-208ENST00000564247 A0A0A6YYD4 124 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 RAB27BO00194 218 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 PDCD6O75340 191 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 TPPPO94811 219 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 SLC25A16P16260 332 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 MNDAP41218 407 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 GPR6P46095 362 aaPredicted RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 HOXA4Q00056 320 aaPredicted RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 PITPNAQ00169 270 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 RBM39Q14498 530 aaKnown RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 PDCD1Q15116 288 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 NKAPLQ5M9Q1 402 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 Q6P435 159 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 FAM131AQ6UXB0 335 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 CCDC190Q86UF4 302 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 MUC20Q8N307 709 aaPredicted RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 DTX3Q8N9I9 347 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 PPP1R35Q8TAP8 253 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms