RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 OR8G1Q15617 311 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 AKR1C8PQ5T2L2 129 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 ZNF343Q6P1L6 599 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 LIAT1Q6ZQX7 453 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 REC114Q7Z4M0 266 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 C5orf24Q7Z6I8 188 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 DTX1Q86Y01 620 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 CCDC71LQ8N9Z2 235 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 MARS2Q96GW9 593 aaKnown RBP10.3□□□□□ -0.76
ABCA3-203ENST00000563623 RIMS4Q9H426 269 aaPredicted RBP10.3□□□□□ -0.76
ABCA3-203ENST00000563623 LIPGQ9Y5X9 500 aa10.3□□□□□ -0.76
ABCA3-203ENST00000563623 CCDC187A0A096LP49 1063 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 A0A1W2PR77 199 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 NPIPB13A6NJU9 1138 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 NPIPB4C9JG80 1138 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
ABCA3-203ENST00000563623 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 C9orf135Q5VTT2 229 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 TMEM123Q8N131 208 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 OR14L1PQ8NHC6 308 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 AKIRIN1Q9H9L7 192 aaPredicted RBP10.29□□□□□ -0.76
ABCA3-203ENST00000563623 P4HTMQ9NXG6 502 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 FER1L5A0AVI2 2057 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 B4GALT1P15291 398 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 AADACP22760 399 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 DDTP30046 118 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 CCL20P78556 96 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 RUNX1Q01196 453 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 TMEM187Q14656 261 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 SPACA9Q96E40 222 aaPredicted RBP10.29□□□□□ -0.76
ABCA3-203ENST00000563623 ALKBH3Q96Q83 286 aaPredicted RBP10.29□□□□□ -0.76
ABCA3-203ENST00000563623 RASL10BQ96S79 203 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 WNT16Q9UBV4 365 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 STARD10Q9Y365 291 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 STRAPQ9Y3F4 350 aaKnown RBP10.29□□□□□ -0.76
ABCA3-203ENST00000563623 LAMA1P25391 3075 aa10.29□□□□□ -0.76
ABCA3-203ENST00000563623 DIDO1Q9BTC0 2240 aaKnown RBP10.29□□□□□ -0.76
ABCA3-203ENST00000563623 UBE2CO00762 179 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 NRASP01111 189 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 GLB1P16278 677 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 TMEM11P17152 192 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 RAB4BP61018 213 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 CNN3Q15417 329 aaKnown RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 OR2C3Q8N628 320 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 THOC3Q96J01 351 aaKnown RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 Q96M66 194 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 CRLF2Q9HC73 371 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 ANAPC10Q9UM13 185 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 AQP7P3A6NL99 342 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 H0YL77 283 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 TNFSF11O14788 317 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 OR8U8P0C7N1 319 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 ATP6V0CP27449 155 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 LBX1P52954 281 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 RHBDD2Q6NTF9 364 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 SYT13Q7L8C5 426 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 C17orf78Q8N4C9 275 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 COMMD1Q8N668 190 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 DMBX1Q8NFW5 382 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 RHBDD1Q8TEB9 315 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 BCO1Q9HAY6 547 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 TUBD1Q9UJT1 453 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 HDGFL3Q9Y3E1 203 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 ZNF705GA8MUZ8 300 aaPredicted RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 MASP2O00187 686 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 HSD17B6O14756 317 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 TRAPPC6AO75865 159 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 SLC34A2O95436 690 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 NXPH1P58417 271 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 TLE1Q04724 770 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 GPR157Q5UAW9 335 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 MAML2Q8IZL2 1156 aaPredicted RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 NFAM1Q8NET5 270 aaPredicted RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 OR5C1Q8NGR4 320 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 FAM86C1Q9NVL1 165 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 METTL1Q9UBP6 276 aaKnown RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 C19orf25Q9UFG5 118 aaPredicted RBP10.28□□□□□ -0.76
ABCA3-203ENST00000563623 ZNF407Q9C0G0 2248 aa10.28□□□□□ -0.76
ABCA3-203ENST00000563623 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 PRSS47A8MTI9 375 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 FOLR2P14207 255 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 AGAP20933 346 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 RPL23AP62750 156 aaKnown RBP10.27□□□□□ -0.76
ABCA3-203ENST00000563623 ENDOGQ14249 297 aaKnown RBP10.27□□□□□ -0.76
ABCA3-203ENST00000563623 OSR2Q8N2R0 312 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 MR1Q95460 341 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 RNF122Q9H9V4 155 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 GPR27Q9NS67 375 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 GAR1Q9NY12 217 aaKnown RBP10.27□□□□□ -0.76
ABCA3-203ENST00000563623 RBM7Q9Y580 266 aaKnown RBP10.27□□□□□ -0.76
ABCA3-203ENST00000563623 MTCH2Q9Y6C9 303 aa10.27□□□□□ -0.76
ABCA3-203ENST00000563623 AHCTF1Q8WYP5 2266 aa10.27□□□□□ -0.77
ABCA3-203ENST00000563623 DOCK7Q96N67 2140 aa10.27□□□□□ -0.77
ABCA3-203ENST00000563623 H3BQ15 152 aa10.27□□□□□ -0.77
ABCA3-203ENST00000563623 CYB5BO43169 146 aa10.27□□□□□ -0.77
ABCA3-203ENST00000563623 HGFACQ04756 655 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms