RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 RAB22AQ9UL26 194 aa4.02□□□□□ -1.77
SMG1-207ENST00000563235 SNX10Q9Y5X0 201 aa4.02□□□□□ -1.77
SMG1-207ENST00000563235 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
SMG1-207ENST00000563235 COL1A1P02452 1464 aaPredicted RBP4.02□□□□□ -1.77
SMG1-207ENST00000563235 NKX2-6A6NCS4 301 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 MYADML2A6NDP7 307 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 A8MWP6 167 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 I3L4J1 428 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 HSPB6O14558 160 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 GPANK1O95872 356 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TBX6O95947 436 aaPredicted RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 H2AFZP0C0S5 128 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 BCKDHAP12694 445 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PGFP49763 221 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 SP4Q02446 784 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 CFHR3Q02985 330 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PLP2Q04941 152 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 FOXF2Q12947 444 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR8B8Q15620 311 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 SCGB2B2Q4G0G5 96 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 GAGE13Q4V321 117 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 Q5BKY6 102 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 LDLRAD2Q5SZI1 272 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 FNDC7Q5VTL7 733 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 H2AFVQ71UI9 128 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 GBGT1Q8N5D6 347 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 SPICQ8N5J4 248 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 HSFY1Q96LI6 401 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 IP6K3Q96PC2 410 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 CDX2Q99626 313 aaPredicted RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 TMPRSS5Q9H3S3 457 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 VSIRQ9H7M9 311 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 DOK5Q9P104 306 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 BTRCQ9Y297 605 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 CDK5RAP2Q96SN8 1893 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZNF816-ZNF321PA0A0X1KG74 233 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ARL5CA6NH57 179 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 C15orf61A6NNL5 157 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PRRG2O14669 202 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 CXCL13O43927 109 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZNF708P17019 499 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 RPL7P18124 248 aaKnown RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 BACE1P56817 501 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 RPL27P61353 136 aaKnown RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 CX3CL1P78423 397 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 MXD1Q05195 221 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ST3GAL4Q11206 333 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ECH1Q13011 328 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZFP69Q49AA0 526 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 RSBN1Q5VWQ0 802 aaPredicted RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZNF773Q6PK81 442 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TCTE3Q8IZS6 198 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PNKDQ8N490 385 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 LINC01465Q8N7H1 131 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZFP41Q8N8Y5 198 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TEX45Q8NA69 505 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZNF439Q8NDP4 499 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR2T33Q8NG76 320 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 RHOXF1Q8NHV9 184 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 FGGYQ96C11 551 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR7D2Q96RA2 312 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 RBKSQ9H477 322 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PTGES2Q9H7Z7 377 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ARMCX1Q9P291 453 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 NTNG1Q9Y2I2 539 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OARD1Q9Y530 152 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 MTCL1Q9Y4B5 1905 aaKnown RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 LOC100130705A0A1B0GUX0 176 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 LRIT2A6NDA9 550 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 DNASE2O00115 360 aaPredicted RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 MRASO14807 208 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 FGF17O60258 216 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 GPR137BO60478 399 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 STK16O75716 305 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 GABARAPO95166 117 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR5H8P0DN80 308 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 HIST1H1AQ02539 215 aaPredicted RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 RBM39Q14498 530 aaKnown RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 HIST3H3Q16695 136 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 UNC50Q53HI1 259 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PAPPA-AS1Q5QFB9 102 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TPTE2P1Q5T6R2 138 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 Q6ZWC4 215 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 DEFB128Q7Z7B8 93 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PRR22Q8IZ63 422 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 KBTBD8Q8NFY9 601 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR2T12Q8NG77 320 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR4M1Q8NGD0 313 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TERB2Q8NHR7 220 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 PIFOQ8TCI5 191 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 DOK4Q8TEW6 326 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 CANT1Q8WVQ1 401 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 EEF1AKMT3Q96AZ1 226 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TP53RKQ96S44 253 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 ZNF649Q9BS31 505 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 RIOK2Q9BVS4 552 aaKnown RBP4.01□□□□□ -1.77
SMG1-207ENST00000563235 OR10A2Q9H208 303 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 TMEM216Q9P0N5 145 aa4.01□□□□□ -1.77
SMG1-207ENST00000563235 EXOSC1Q9Y3B2 195 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms