RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 RBP2P50120 134 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 CRISP1P54107 249 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 ATP1B3P54709 279 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 DGCR2P98153 550 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 HLA-DRB5Q30154 266 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 KLHL22Q53GT1 634 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 NXNL2Q5VZ03 156 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 ETV3LQ6ZN32 361 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 RNF144BQ7Z419 303 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM58AQ8N1B3 248 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 ADI1Q9BV57 179 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 U3KQK5 164 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 A0A087X0M5 115 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 A0A1B0GX30 115 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 SH2D1BO14796 132 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 MMP23AO75900 390 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 OR3A1P47881 315 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 KPNB1Q14974 876 aaKnown RBP12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 C9orf152Q5JTZ5 239 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 OR4D6Q8NGJ1 314 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 NRBF2Q96F24 287 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 DNAH9Q9NYC9 4486 aa12.5□□□□□ -0.41
HERPUD1-205ENST00000562914 C3orf84H3BNL1 204 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 ENTPD6O75354 484 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM107AO95990 144 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 CSN2P05814 226 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 PRKACGP22612 351 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 PTGFRP43088 359 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 SLC35B1P78383 322 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 PTGES3Q15185 160 aaKnown RBP12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 PRAMEF5Q5TYX0 476 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 OR2W3Q7Z3T1 314 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 CATSPERDQ86XM0 798 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 GID4Q8IVV7 300 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 YIPF7Q8N8F6 280 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 BCAS4Q8TDM0 211 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 CANT1Q8WVQ1 401 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 NSL1Q96IY1 281 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 P2RX4Q99571 388 aa12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 EXOSC4Q9NPD3 245 aaKnown RBP12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 RBFOX1Q9NWB1 397 aaKnown RBP12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 AMMECR1Q9Y4X0 333 aaPredicted RBP12.49□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A18PA6NE21 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A16PA6NEW6 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A20PA6NIJ5 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A9PA6NNJ1 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A12PA8MX19 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A5PA8MXJ8 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 H0YHG0 523 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FGF16O43320 207 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 PRKYO43930 277 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 SULT1C4O75897 302 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 INMTO95050 263 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A15PP0C7V4 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A13PP0C7W8 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A14PP0C7W9 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM90A24PP0C7X0 464 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 UBCP0CG48 685 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 PRKACAP17612 351 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 CALB2P22676 271 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 PRKACBP22694 351 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 OR3A4PP47883 348 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 AADACL4Q5VUY2 407 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 PLEKHG7Q6ZR37 379 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 HS3ST5Q8IZT8 346 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 CHST4Q8NCG5 386 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 CCDC124Q96CT7 223 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 ZNF286AQ9HBT8 521 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 HMG20AQ9NP66 347 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 KRT84Q9NSB2 600 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 IL36RNQ9UBH0 155 aa12.48□□□□□ -0.41
HERPUD1-205ENST00000562914 ZNF729A6NN14 1252 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 RPP14O95059 124 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 BCL3P20749 454 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 NPBWR2P48146 333 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 MTCP1P56278 107 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 EFNB1P98172 346 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 LHFPL2Q6ZUX7 228 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 OR9G1Q8NH87 305 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 TMEM163Q8TC26 289 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 RPEQ96AT9 228 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 COMMD4Q9H0A8 199 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 OR6C3Q9NZP0 311 aa12.47□□□□□ -0.41
HERPUD1-205ENST00000562914 ODAMA1E959 279 aa12.46□□□□□ -0.41
HERPUD1-205ENST00000562914 METTL15A6NJ78 407 aa12.46□□□□□ -0.41
HERPUD1-205ENST00000562914 SH2D7A6NKC9 451 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-205ENST00000562914 SIRPB1O00241 398 aa12.46□□□□□ -0.41
HERPUD1-205ENST00000562914 OR2H2O95918 312 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms