RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 YIF1AO95070 293 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 NTN1O95631 604 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DHFRP00374 187 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CYB5R3P00387 301 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 OXTP01178 125 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 BGLAPP02818 100 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CRYBA1P05813 215 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 IGKV2-30P06310 120 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CST2P09228 141 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR4Q2P0C623 313 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZDHHC11BP0C7U3 371 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PATE4P0C8F1 98 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CD36P16671 472 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 GADD45AP24522 165 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CXCR1P25024 350 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ELK4P28324 431 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CD34P28906 385 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SLC6A1P30531 599 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 RPL5P46777 297 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 UBE2AP49459 152 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 NUDT2P50583 147 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DIO3P55073 304 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 GFERP55789 205 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TAS2R41P59536 307 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SNAP25P60880 206 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 RAB2AP61019 212 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 NAA20P61599 178 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DAD1P61803 113 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PPP1CAP62136 330 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 HIST1H3AP68431 136 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 H3F3AP84243 136 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ERCC8Q13216 396 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 FAM53BQ14153 422 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 EBPQ15125 230 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 PRR4Q16378 134 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SNRNP35Q16560 246 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZNF630Q2M218 657 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 LRRC75BQ2VPJ9 315 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TIMM50Q3ZCQ8 353 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 C6orf99Q4VX62 202 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZNF585BQ52M93 769 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CENPWQ5EE01 88 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 FBXW9Q5XUX1 488 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 KCTD16Q68DU8 428 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DHRS4L2Q6PKH6 230 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PAMR1Q6UXH9 720 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 LINC00173Q6ZV60 143 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 NOTCH2NLQ7Z3S9 236 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CROCCP2Q86T23 111 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TGIF2LYQ8IUE0 185 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZBTB8OSQ8IWT0 167 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 LRRC25Q8N386 305 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 Q8N3U1 123 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TMEM35BQ8NCS4 154 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR4M1Q8NGD0 313 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR1L8Q8NGR8 309 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR1J4Q8NGS1 313 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR10D3Q8NH80 312 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 RHOXF1Q8NHV9 184 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 RNASE11Q8TAA1 199 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 NTN5Q8WTR8 489 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 TMEM190Q8WZ59 177 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DCUN1D4Q92564 292 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 C12orf43Q96C57 262 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 LRRC58Q96CX6 371 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CPNE2Q96FN4 548 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 FMC1Q96HJ9 113 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DIRAS2Q96HU8 199 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SLC35E1Q96K37 410 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CNBD2Q96M20 576 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 YPEL4Q96NS1 127 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR2A7Q96R45 310 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TIMM17AQ99595 171 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 NRIP2Q9BQI9 281 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TMEM243Q9BU79 118 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TMEM70Q9BUB7 260 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TMEM109Q9BVC6 243 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 DDA1Q9BW61 102 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SLC25A39Q9BZJ4 359 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR51I1Q9H343 314 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ASB7Q9H672 318 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 METTL17Q9H7H0 456 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 VSIRQ9H7M9 311 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZNF430Q9H8G1 570 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 HES4Q9HCC6 221 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CCL28Q9NRJ3 127 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SLC7A10Q9NS82 523 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CISHQ9NSE2 258 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZNF226Q9NYT6 803 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 TMEM216Q9P0N5 145 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZNF225Q9UK10 706 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PSG11Q9UQ72 335 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 POMPQ9Y244 141 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SIGLEC7Q9Y286 467 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ZNF257Q9Y2Q1 563 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 UTP11Q9Y3A2 253 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 PRELID3BQ9Y3B1 194 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 HDGFL3Q9Y3E1 203 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 HSPB11Q9Y547 144 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 WSB1Q9Y6I7 421 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms