RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 OR8G5Q8NG78 346 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR56B1Q8NGI3 324 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR5D14Q8NGL3 314 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR13C9Q8NGT0 318 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR5H2Q8NGV7 314 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR13G1Q8NGZ3 307 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR4K15Q8NH41 348 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR51F2Q8NH61 342 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR6X1Q8NH79 312 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR1L3Q8NH93 324 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 LILRB1Q8NHL6 650 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 RXFP4Q8TDU9 374 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PAQR8Q8TEZ7 354 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GLYATL2Q8WU03 294 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SFT2D1Q8WV19 159 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 TMED6Q8WW62 240 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HPSE2Q8WWQ2 592 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PP6455Q8WZ26 134 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 C11orf40Q8WZ69 217 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ROBO4Q8WZ75 1007 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 EMG1Q92979 244 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 HIST1H2BAQ96A08 127 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 FGGYQ96C11 551 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SLC25A36Q96CQ1 311 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 NTNG2Q96CW9 530 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 DDIT4LQ96D03 193 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 C10orf35Q96D05 121 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MRPL38Q96DV4 380 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 RAB3CQ96E17 227 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MALSU1Q96EH3 234 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GALNT14Q96FL9 552 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SEC22AQ96IW7 307 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ARL5BQ96KC2 179 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 YPEL4Q96NS1 127 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SCGB3A2Q96PL1 93 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR5B2Q96R09 309 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TAAR9Q96RI9 348 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GAL3ST1Q99999 423 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 RTBDNQ9BSG5 229 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 URM1Q9BTM9 101 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 ADAT1Q9BUB4 502 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 ELOVL1Q9BW60 279 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SCRT1Q9BWW7 348 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 C1QTNF4Q9BXJ3 329 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PECRQ9BY49 303 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SELENOIQ9C0D9 397 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CHST5Q9GZS9 411 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TLNRD1Q9H1K6 362 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SAV1Q9H4B6 383 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 C11orf1Q9H5F2 150 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PTGES2Q9H7Z7 377 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZMAT3Q9HA38 289 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 RHOFQ9HBH0 211 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 BIN3Q9NQY0 253 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PARP11Q9NR21 331 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SERINC1Q9NRX5 453 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SLC22A11Q9NSA0 550 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 UQCC1Q9NVA1 299 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SOHLH2Q9NX45 425 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MED29Q9NX70 200 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR5AC2Q9NZP5 309 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MLXQ9UH92 298 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CD207Q9UJ71 328 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 FARSAQ9Y285 508 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 RPH3AQ9Y2J0 694 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 AMDHD2Q9Y303 409 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MEMO1Q9Y316 297 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TIMM10BQ9Y5J6 103 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 KPTNQ9Y664 436 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SLCO1B1Q9Y6L6 691 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 V9GYS6 101 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PI4KAP42356 2102 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CACNA1EQ15878 2313 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ASCC3Q8N3C0 2202 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 ABCA7Q8IZY2 2146 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 PTPRBP23467 1997 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SHANK1Q9Y566 2161 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 LOC100509620A0A075B734 347 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 IGHV1OR15-9A0A0B4J2B8 117 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 IGKV3D-20A0A0C4DH25 116 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 A0A1W2PP11 408 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 C5orf52A6NGY3 159 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 AQP7P3A6NL99 342 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 VSTM2BA6NLU5 285 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 COLCA2A8K830 154 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 RHPN2P1A8MT19 583 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF705EA8MWA4 302 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 FAM25EA8MYX2 175 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 EEF1E1-BLOC1S5C9J1V9 151 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 LMO7DNF2Z398 122 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 RNASEK-C17orf49H0YIS7 233 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 K7N7A8 449 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 DUX1O43812 170 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 EFNA2O43921 213 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF354AO60765 605 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 LRP3O75074 770 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 MED6O75586 246 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 DHRS3O75911 302 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms