RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 GABRR1P24046 479 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 PTGFRP43088 359 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 GP2P55259 537 aaKnown RBP9.9□□□□□ -0.82
USP8-212ENST00000560730 PPP3R1P63098 170 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 SCN1BQ07699 218 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 SPIN3Q5JUX0 258 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 FAM27D1Q5T7N8 215 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 Q6P435 159 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 UNQ9370/PRO34162Q6UXP9 181 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 C1orf122Q6ZSJ8 110 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 PRSS48Q7RTY5 328 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 CMTM4Q8IZR5 234 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 OR8H2Q8N162 312 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 PNKDQ8N490 385 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 TPRX1Q8N7U7 411 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.9□□□□□ -0.82
USP8-212ENST00000560730 PXT1Q8NFP0 134 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 NR1H4Q96RI1 486 aaPredicted RBP9.9□□□□□ -0.82
USP8-212ENST00000560730 ZNF184Q99676 751 aaPredicted RBP9.9□□□□□ -0.82
USP8-212ENST00000560730 TMED9Q9BVK6 235 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 NOX4Q9NPH5 578 aa9.9□□□□□ -0.82
USP8-212ENST00000560730 DNAJC9-AS1A6NH13 148 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 DENRO43583 198 aaKnown RBP9.9□□□□□ -0.83
USP8-212ENST00000560730 MAS1P04201 325 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 ZNF93P35789 620 aaPredicted RBP9.9□□□□□ -0.83
USP8-212ENST00000560730 OR3A1P47881 315 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 DLX6P56179 175 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 EDDM3BP56851 147 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 EDDM3AQ14507 147 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 GRK1Q15835 563 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 ACSM3Q53FZ2 586 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 LIPKQ5VXJ0 399 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 ELP2Q6IA86 826 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 HCP5Q6MZN7 132 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 FIP1L1Q6UN15 594 aaKnown RBP9.9□□□□□ -0.83
USP8-212ENST00000560730 GDPD3Q7L5L3 318 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 TCF23Q7RTU1 214 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 OR5D13Q8NGL4 314 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 FAM192AQ9GZU8 254 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 PPIL3Q9H2H8 161 aaKnown RBP9.9□□□□□ -0.83
USP8-212ENST00000560730 METTL8Q9H825 291 aaKnown RBP9.9□□□□□ -0.83
USP8-212ENST00000560730 RHOFQ9HBH0 211 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 EXOSC4Q9NPD3 245 aaKnown RBP9.9□□□□□ -0.83
USP8-212ENST00000560730 ZNF581Q9P0T4 197 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 ING4Q9UNL4 249 aa9.9□□□□□ -0.83
USP8-212ENST00000560730 STAB1Q9NY15 2570 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 A0A0G2JK05 382 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 A0A0U1RQK1 487 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 HTR3BO95264 441 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 HSMCR30P0CW71 290 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 PRTN3P24158 256 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 EEF1B2P24534 225 aaKnown RBP9.89□□□□□ -0.83
USP8-212ENST00000560730 LMO1P25800 156 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 MTNR1BP49286 362 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 BPIFB3P59826 476 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 UBA52P62987 128 aaKnown RBP9.89□□□□□ -0.83
USP8-212ENST00000560730 BAMBIQ13145 260 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 TPBGQ13641 420 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 RSU1Q15404 277 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 PIGYQ3MUY2 71 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 METAP1DQ6UB28 335 aaPredicted RBP9.89□□□□□ -0.83
USP8-212ENST00000560730 RBMS3Q6XE24 437 aaKnown RBP9.89□□□□□ -0.83
USP8-212ENST00000560730 LYPD6Q86Y78 171 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 Q8NFD4 153 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 TMEM203Q969S6 136 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 CPNE2Q96FN4 548 aaPredicted RBP9.89□□□□□ -0.83
USP8-212ENST00000560730 PRDM13Q9H4Q3 707 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 UNKLQ9H9P5 680 aaKnown RBP9.89□□□□□ -0.83
USP8-212ENST00000560730 CKLFQ9UBR5 152 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 GLS2Q9UI32 602 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 FOXJ3Q9UPW0 622 aa9.89□□□□□ -0.83
USP8-212ENST00000560730 A0A1W2PP11 408 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 SLC33A1O00400 549 aaPredicted RBP9.88□□□□□ -0.83
USP8-212ENST00000560730 MGST3O14880 152 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 DEGS1O15121 323 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 SC5DO75845 299 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 ZNF44P15621 663 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 RPS25P62851 125 aaKnown RBP9.88□□□□□ -0.83
USP8-212ENST00000560730 GPR50Q13585 617 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 BLMHQ13867 455 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 SLC9A3R2Q15599 337 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 TMEM91Q6ZNR0 172 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 JAGN1Q8N5M9 183 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 MS4A15Q8N5U1 240 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 OR51T1Q8NGJ9 327 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 MUL1Q969V5 352 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 JMJD8Q96S16 334 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 MGLLQ99685 303 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 METTL9Q9H1A3 318 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 PPA2Q9H2U2 334 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 ISYNA1Q9NPH2 558 aa9.88□□□□□ -0.83
USP8-212ENST00000560730 TRAV24A0A0B4J272 114 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 C17orf98A8MV24 154 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 NPFFO15130 113 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 CPEP16870 476 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 MAPK3P27361 379 aaPredicted RBP9.87□□□□□ -0.83
USP8-212ENST00000560730 GLIPR1P48060 266 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 UBE2E1P51965 193 aa9.87□□□□□ -0.83
USP8-212ENST00000560730 MEF2CQ06413 473 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms