RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 NEFHP12036 1026 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 CPA3P15088 417 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 CDH12P55289 794 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 DLX6P56179 175 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 DNAJB13P59910 316 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 NAA20P61599 178 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 ESRRGP62508 458 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 HBA1P69905 142 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 GAGE2BQ13066 116 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 KIAA0040Q15053 153 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 GAGE2EQ4V326 116 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 LIN52Q52LA3 116 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 PIK3CD-AS1Q5SR53 167 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 GAGE2AQ6NT46 116 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 SMARCD3Q6STE5 483 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 ZCCHC23Q6ZST2 131 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 HDDC2Q7Z4H3 204 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 NR2C2APQ86WQ0 139 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 UBE2DNLQ8IWF7 75 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 LAX1Q8IWV1 398 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 C11orf53Q8IXP5 236 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 PEX5LQ8IYB4 626 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 OR4P4Q8NGL7 312 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 OR2T11Q8NH01 316 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 SLAMF9Q96A28 289 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 FCRL1Q96LA6 429 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 TRNT1Q96Q11 434 aaKnown RBP4.72□□□□□ -1.65
HERC1-208ENST00000560462 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 TOLLIPQ9H0E2 274 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 RAD21L1Q9H4I0 556 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 TAS2R5Q9NYW4 299 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 ADA2Q9NZK5 511 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 GAGE2DQ9UEU5 116 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 PIGLQ9Y2B2 252 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 OR6C6A6NF89 314 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 OR2AT4A6NND4 320 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 MGST3O14880 152 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 AZIN1O14977 448 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 TRMUO75648 421 aaKnown RBP4.71□□□□□ -1.66
HERC1-208ENST00000560462 MT-ATP6P00846 226 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 IFNA21P01568 189 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 IFNA17P01571 189 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 CHRNGP07510 517 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 NR2C1P13056 603 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 ACADSP16219 412 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 MSR1P21757 451 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 RPL3P39023 403 aaKnown RBP4.71□□□□□ -1.66
HERC1-208ENST00000560462 MDH1P40925 334 aaKnown RBP4.71□□□□□ -1.66
HERC1-208ENST00000560462 MNDAP41218 407 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 CSNK2BP67870 215 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 HOXC5Q00444 222 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 CD47Q08722 323 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 HES1Q14469 280 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 SYPL1Q16563 259 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 ZNF767PQ75MW2 155 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 PGAP1Q75T13 922 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 DPY19L4Q7Z388 723 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 C10orf107Q8IVU9 208 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 NATD1Q8N6N6 113 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 CSNK2A3Q8NEV1 391 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 OR2T27Q8NH04 317 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 OR1F12Q8NHA8 337 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 AGR3Q8TD06 166 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 TWIST2Q8WVJ9 160 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 SLCO4A1Q96BD0 722 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 FLYWCH2Q96CP2 140 aaKnown RBP4.71□□□□□ -1.66
HERC1-208ENST00000560462 KCTD7Q96MP8 289 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 RNF126Q9BV68 326 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 CLEC7AQ9BXN2 247 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 TUBB1Q9H4B7 451 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 C1orf109Q9NX04 203 aa4.71□□□□□ -1.66
HERC1-208ENST00000560462 IGKV1D-17A0A075B6S4 117 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 A0A1W2PPQ1 181 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 CD300LBA8K4G0 201 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 LEUTXA8MZ59 168 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 DLGAP1O14490 977 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 BHLHE40O14503 412 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 CDIPTO14735 213 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 ARPC1BO15143 372 aaKnown RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 SLC22A2O15244 555 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 SERPINA1P01009 418 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 RLN1P04808 185 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 LGALS1P09382 135 aaKnown RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 LINC00032P0C843 101 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 ZNF728P0DKX0 622 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 OR5H8P0DN80 308 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 PIPP12273 146 aaPredicted RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 ZNF20P17024 532 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 CHI3L1P36222 383 aaPredicted RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 SNRPEP62304 92 aaKnown RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 RFTN2Q52LD8 501 aaPredicted RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 C6orf10Q5SRN2 563 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 SLC25A47Q6Q0C1 308 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 LRRC74BQ6ZQY2 392 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 MRPL21Q7Z2W9 205 aaKnown RBP4.7□□□□□ -1.66
HERC1-208ENST00000560462 AMIGO2Q86SJ2 522 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 WDR86Q86TI4 376 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
HERC1-208ENST00000560462 C6orf223Q8N319 242 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms