RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ARSJQ5FYB0 599 aaPredicted RBP11.42□□□□□ -0.58
TPM1-223ENST00000560445 RDH10Q8IZV5 341 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 OR5AK2Q8NH90 309 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 NDNFQ8TB73 568 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 TSEN15Q8WW01 171 aaKnown RBP11.42□□□□□ -0.58
TPM1-223ENST00000560445 LGALS12Q96DT0 336 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 PRSS22Q9GZN4 317 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 C8orf4Q9NR00 106 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 TAS2R3Q9NYW6 316 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 DHDHQ9UQ10 334 aa11.42□□□□□ -0.58
TPM1-223ENST00000560445 DSCAML1Q8TD84 2053 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 OR4C45A6NMZ5 311 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 SULT1B1O43704 296 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 KDM4BO94953 1096 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 INMTO95050 263 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 IGHA1P01876 353 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 ZNF44P15621 663 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 BCL3P20749 454 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 HTR1DP28221 377 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 BRS3P32247 399 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 MTNR1BP49286 362 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 DEFA6Q01524 100 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 SSX2Q16385 188 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 TMPRSS11AQ6ZMR5 421 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 C16orf82Q7Z2V1 217 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 RHOXF1Q8NHV9 184 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 NKX3-1Q99801 234 aaPredicted RBP11.41□□□□□ -0.58
TPM1-223ENST00000560445 TMEM133Q9H2Q1 129 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 OR6C3Q9NZP0 311 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 GSTK1Q9Y2Q3 226 aa11.41□□□□□ -0.58
TPM1-223ENST00000560445 IGHV2-26A0A0B4J1V2 119 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 IGKV1-9A0A0C4DH69 117 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 TMEM82A0PJX8 343 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 F8VVB4 439 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 F8VWA3 439 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 TMEM225BP0DP42 221 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 RAB3AP20336 220 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 PTGFRP43088 359 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 NPBWR2P48146 333 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 NANOS3P60323 173 aaKnown RBP11.4□□□□□ -0.58
TPM1-223ENST00000560445 SLC34A1Q06495 639 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 ZSCAN26Q16670 478 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 CCDC58Q4VC31 144 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 PDLIM3Q53GG5 364 aaPredicted RBP11.4□□□□□ -0.58
TPM1-223ENST00000560445 LPCAT4Q643R3 524 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 CCDC144NLQ6NUI1 221 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 PARP16Q8N5Y8 322 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 KLHDC1Q8N7A1 406 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 OR4D6Q8NGJ1 314 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 C17orf50Q8WW18 174 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 CHST6Q9GZX3 395 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 PCDHB16Q9NRJ7 776 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 FAM118AQ9NWS6 357 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 ERVK13-1Q9NX77 482 aa11.4□□□□□ -0.58
TPM1-223ENST00000560445 E9PQ18 207 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 SIRPB1O00241 398 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 TOR1AO14656 332 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 OR2H2O95918 312 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 MYL12AP19105 171 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 LMO1P25800 156 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 OR3A1P47881 315 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 KCNJ3P48549 501 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 PPP3R1P63098 170 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 EMX1Q04741 257 aaPredicted RBP11.39□□□□□ -0.59
TPM1-223ENST00000560445 KISS1Q15726 138 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 LHFPL4Q7Z7J7 247 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 LHFPL3Q86UP9 236 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 Q8N2B8 174 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 OR4S1Q8NGB4 309 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 GPR148Q8TDV2 347 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 CORO2AQ92828 525 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 GPER1Q99527 375 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 SLC29A1Q99808 456 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 JAM3Q9BX67 310 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 MRPS18AQ9NVS2 196 aaKnown RBP11.39□□□□□ -0.59
TPM1-223ENST00000560445 PAK1IP1Q9NWT1 392 aaPredicted RBP11.39□□□□□ -0.59
TPM1-223ENST00000560445 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
TPM1-223ENST00000560445 SMPD3Q9NY59 655 aaPredicted RBP11.39□□□□□ -0.59
TPM1-223ENST00000560445 DPM3Q9P2X0 92 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
TPM1-223ENST00000560445 TRRAPQ9Y4A5 3859 aa11.39□□□□□ -0.59
TPM1-223ENST00000560445 ODAMA1E959 279 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 MEGF11A6BM72 1044 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 LEUTXA8MZ59 168 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 DEGS1O15121 323 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 PSPNO60542 156 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 ZFPL1O95159 310 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 GABRB1P18505 474 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 DCKP27707 260 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 DUSP1P28562 367 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 MNDAP41218 407 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 PRRX1P54821 245 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 SNU13P55769 128 aaKnown RBP11.38□□□□□ -0.59
TPM1-223ENST00000560445 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 BDH1Q02338 343 aa11.38□□□□□ -0.59
TPM1-223ENST00000560445 KRBOX4Q5JUW0 171 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms