RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 HCKP08631 526 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 MMP9P14780 707 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 IGFBP3P17936 291 aaPredicted RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 BCL3P20749 454 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 PRDX2P32119 198 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 NPBWR2P48146 333 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 ZNF45Q02386 682 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 SCGB2A2Q13296 93 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 KISS1Q15726 138 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 TPRA1Q86W33 373 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 SAXO1Q8IYX7 474 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 PNLDC1Q8NA58 520 aaKnown RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 ZSCAN4Q8NAM6 433 aaPredicted RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 ZNRF1Q8ND25 227 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 TMEM185AQ8NFB2 350 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 OR5D18Q8NGL1 313 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 OR6Q1Q8NGQ2 317 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 C8orf46Q8TAG6 207 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 EMG1Q92979 244 aaKnown RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 SLC25A46Q96AG3 418 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 ORAI1Q96D31 301 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 OR14A2Q96R54 314 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 DCTN5Q9BTE1 182 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 ELL3Q9HB65 397 aaPredicted RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 RBFOX1Q9NWB1 397 aaKnown RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 IL36RNQ9UBH0 155 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 OR14J1Q9UGF5 321 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 SF3B6Q9Y3B4 125 aaKnown RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 TRBV23-1A0A0A0MS06 115 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 GABRPO00591 440 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 ZNF737O75373 536 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 KDM4BO94953 1096 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 ALDOBP05062 364 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 SFTPBP07988 381 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 IGHV4-38-2P0DP08 117 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 NDUFB7P17568 137 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 FSTP19883 344 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 MYL9P24844 172 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 MAPK3P27361 379 aaPredicted RBP7.72□□□□□ -1.17
LDLR-211ENST00000560173 CD40LGP29965 261 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 MTNR1BP49286 362 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 BMXP51813 675 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 CAPZA1P52907 286 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 RPS25P62851 125 aaKnown RBP7.72□□□□□ -1.17
LDLR-211ENST00000560173 PPP3R1P63098 170 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 SPANXN2Q5MJ10 180 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 MZT2AQ6P582 158 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 C16orf87Q6PH81 154 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 FAM58AQ8N1B3 248 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 ZNF561Q8N587 486 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 OR52N4Q8NGI2 321 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 ACOT12Q8WYK0 555 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 H1FXQ92522 213 aaKnown RBP7.72□□□□□ -1.17
LDLR-211ENST00000560173 KCTD12Q96CX2 325 aaKnown RBP7.72□□□□□ -1.17
LDLR-211ENST00000560173 CPNE2Q96FN4 548 aaPredicted RBP7.72□□□□□ -1.17
LDLR-211ENST00000560173 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 WDFY2Q96P53 400 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 DERL3Q96Q80 235 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 TBX15Q96SF7 602 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 SIRPDQ9H106 197 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 SEBOXQ9HB31 216 aaPredicted RBP7.72□□□□□ -1.17
LDLR-211ENST00000560173 TMEM138Q9NPI0 162 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 ADAM30Q9UKF2 790 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 NUP50Q9UKX7 468 aa7.72□□□□□ -1.17
LDLR-211ENST00000560173 TRAV8-7A0A075B6U6 113 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 IGHV3OR16-10A0A075B7F0 116 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TRAV40A0A0B4J280 105 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TMEM82A0PJX8 343 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 K7N7A8 449 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 PIN1P1O15428 100 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 MAGEB3O15480 346 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TOX4O94842 621 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 CDRT1O95170 752 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 HAND1O96004 215 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 CHRM2P08172 466 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TMEM225BP0DP42 221 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 CALCBP10092 127 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 PRKACAP17612 351 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 BDKRB2P30411 391 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 RANBP1P43487 201 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 ARF6P62330 175 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 FABP5Q01469 135 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 COL10A1Q03692 680 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 ZNF146Q15072 292 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 SPIN3Q5JUX0 258 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 DDI2Q5TDH0 399 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 METTL11BQ5VVY1 283 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 C22orf42Q6IC83 251 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 FIP1L1Q6UN15 594 aaKnown RBP7.71□□□□□ -1.18
LDLR-211ENST00000560173 BPIFB2Q8N4F0 458 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 KIR3DL3Q8N743 410 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 PXT1Q8NFP0 134 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TNFAIP8L1Q8WVP5 186 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TMEM203Q969S6 136 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 GPER1Q99527 375 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 SLC6A7Q99884 636 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 PCGF1Q9BSM1 259 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 TMED9Q9BVK6 235 aa7.71□□□□□ -1.18
LDLR-211ENST00000560173 C6orf62Q9GZU0 229 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms