RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 PQLC1Q8N2U9 271 aa14.29□□□□□ -0.12
HDDC3-205ENST00000559898 C9orf16Q9BUW7 83 aa14.29□□□□□ -0.12
HDDC3-205ENST00000559898 TCF19Q9Y242 345 aa14.29□□□□□ -0.12
HDDC3-205ENST00000559898 SIRT4Q9Y6E7 314 aaPredicted RBP14.29□□□□□ -0.12
HDDC3-205ENST00000559898 NOTCH1P46531 2555 aa14.29□□□□□ -0.12
HDDC3-205ENST00000559898 IGHV2-26A0A0B4J1V2 119 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 VGLL3A8MV65 326 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 LIMS3P0CW19 117 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 LIMS4P0CW20 117 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 PRKACBP22694 351 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 PEX2P28328 305 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 MEF2CQ06413 473 aaPredicted RBP14.28□□□□□ -0.12
HDDC3-205ENST00000559898 SCN1BQ07699 218 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 AESQ08117 197 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 CDK5R1Q15078 307 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 AANATQ16613 207 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 TMEM95Q3KNT9 176 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 ZBTB49Q6ZSB9 765 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 OR51A2Q8NGJ7 313 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 OR13D1Q8NGV5 346 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 SPSB1Q96BD6 273 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 ORAI1Q96D31 301 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 COQ2Q96H96 371 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 PPIL3Q9H2H8 161 aaKnown RBP14.28□□□□□ -0.12
HDDC3-205ENST00000559898 ZCCHC4Q9H5U6 513 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 SEBOXQ9HB31 216 aaPredicted RBP14.28□□□□□ -0.12
HDDC3-205ENST00000559898 SERTAD4Q9NUC0 356 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 LINC00312Q9Y6C7 94 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 SESN1Q9Y6P5 492 aa14.28□□□□□ -0.12
HDDC3-205ENST00000559898 A0A0G2JK05 382 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 hCG_1809904A0A1W2PP81 198 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 A0A1W2PPE2 198 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 A0A1W2PR64 198 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 A0A1W2PRV1 198 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 hADV38S2A0JD32 116 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 VSIG10L2P0DP72 767 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 CD24P25063 80 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 ETV1P50549 477 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 P2RX3P56373 397 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 Q8IYB0 196 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 OR4P4Q8NGL7 312 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 OR4C13Q8NGP0 309 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 CNIH3Q8TBE1 160 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 NEK6Q9HC98 313 aa14.27□□□□□ -0.13
HDDC3-205ENST00000559898 EXOSC4Q9NPD3 245 aaKnown RBP14.27□□□□□ -0.13
HDDC3-205ENST00000559898 TBL2Q9Y4P3 447 aaKnown RBP14.27□□□□□ -0.13
HDDC3-205ENST00000559898 TGP01266 2768 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 MGST3O14880 152 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 BAG2O95816 211 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 RBP4P02753 201 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 MT-ND2P03891 347 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 SOX2P48431 317 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 BLCAPP62952 87 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 ATXN7L3Q14CW9 347 aaPredicted RBP14.26□□□□□ -0.13
HDDC3-205ENST00000559898 HERPUD1Q15011 391 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 ZSCAN26Q16670 478 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 SPIN3Q5JUX0 258 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 OR2G6Q5TZ20 316 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 TRAPPC6BQ86SZ2 158 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 SYS1Q8N2H4 156 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 OR10K1Q8NGX5 313 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 CFHR4Q92496 578 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 MALSU1Q96EH3 234 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 CDCA4Q9BXL8 241 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 COMMD4Q9H0A8 199 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 TMEM133Q9H2Q1 129 aa14.26□□□□□ -0.13
HDDC3-205ENST00000559898 MRPS18AQ9NVS2 196 aaKnown RBP14.26□□□□□ -0.13
HDDC3-205ENST00000559898 SLC33A1O00400 549 aaPredicted RBP14.25□□□□□ -0.13
HDDC3-205ENST00000559898 HSPB6O14558 160 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 SH2D1BO14796 132 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 CYB5AP00167 134 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 LALBAP00709 142 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 HCKP08631 526 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 CD28P10747 220 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 LMO1P25800 156 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 DOC2BQ14184 412 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 KISS1Q15726 138 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 PARP16Q8N5Y8 322 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 OR13C5Q8NGS8 318 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 OR5AK2Q8NH90 309 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 CYYR1Q96J86 154 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
HDDC3-205ENST00000559898 ZNF286AQ9HBT8 521 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 TAS2R4Q9NYW5 299 aa14.25□□□□□ -0.13
HDDC3-205ENST00000559898 GABRPO00591 440 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 SULT1B1O43704 296 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 FADS2O95864 444 aaKnown RBP14.24□□□□□ -0.13
HDDC3-205ENST00000559898 OCM2P0CE71 109 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 OCMP0CE72 109 aaPredicted RBP14.24□□□□□ -0.13
HDDC3-205ENST00000559898 TMEM225BP0DP42 221 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 ZNF44P15621 663 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 CDK2P24941 298 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 ERP29P30040 261 aaKnown RBP14.24□□□□□ -0.13
HDDC3-205ENST00000559898 SLC34A1Q06495 639 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 RAB40BQ12829 278 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 LRRC36Q1X8D7 754 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 C17orf58Q2M2W7 97 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 ZNF691Q5VV52 312 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 OR2T6Q8NHC8 308 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms