RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CHST6Q9GZX3 395 aa7.33□□□□□ -1.24
HDDC3-204ENST00000559834 KRT84Q9NSB2 600 aa7.33□□□□□ -1.24
HDDC3-204ENST00000559834 TAS2R3Q9NYW6 316 aa7.33□□□□□ -1.24
HDDC3-204ENST00000559834 ZMAT5Q9UDW3 170 aaKnown RBP7.33□□□□□ -1.24
HDDC3-204ENST00000559834 WARS2Q9UGM6 360 aaKnown RBP7.33□□□□□ -1.24
HDDC3-204ENST00000559834 ENOPH1Q9UHY7 261 aa7.33□□□□□ -1.24
HDDC3-204ENST00000559834 A0A1W2PQL4 384 aaPredicted RBP7.32□□□□□ -1.24
HDDC3-204ENST00000559834 OOSP1A8MZH6 123 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 MMP23AO75900 390 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 OCM2P0CE71 109 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 OCMP0CE72 109 aaPredicted RBP7.32□□□□□ -1.24
HDDC3-204ENST00000559834 CDK2P24941 298 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 CD24P25063 80 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 DUSP1P28562 367 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 POU3F4P49335 361 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 P2RX3P56373 397 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 CD69Q07108 199 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 TCTEX1D4Q5JR98 221 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 OSR2Q8N2R0 312 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 OR4D6Q8NGJ1 314 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 IL4I1Q96RQ9 567 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 EXOSC4Q9NPD3 245 aaKnown RBP7.32□□□□□ -1.24
HDDC3-204ENST00000559834 INPP5EQ9NRR6 644 aa7.32□□□□□ -1.24
HDDC3-204ENST00000559834 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 TCRBV3S1A0A5B6 114 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 ZAR1LA6NP61 321 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 G3V2T6 193 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 H3BSH0 61 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 BUB1B-PAK6H3BSN5 160 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 GYG2O15488 501 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 ENTPD6O75354 484 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 IGLV1-47P01700 117 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 UBCP0CG48 685 aaKnown RBP7.31□□□□□ -1.24
HDDC3-204ENST00000559834 PRKACAP17612 351 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 ATF1P18846 271 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 BCL3P20749 454 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 LMO1P25800 156 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 CD34P28906 385 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 SLC6A1P30531 599 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 OR3A1P47881 315 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 NPBWR2P48146 333 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 EGFEM1PQ0D2K5 195 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 PDZK1IP1Q13113 114 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 DNAL1Q4LDG9 190 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 C9orf152Q5JTZ5 239 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 PRAMEF5Q5TYX0 476 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 TMEM244Q5VVB8 128 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 C12orf73Q69YU5 71 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 UNQ9370/PRO34162Q6UXP9 181 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 LHFPL2Q6ZUX7 228 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 FAM220AQ7Z4H9 259 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 THNSL2Q86YJ6 484 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 OR10H4Q8NGA5 316 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 TBX5Q99593 518 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 RHOFQ9HBH0 211 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 NEK6Q9HC98 313 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 HMG20AQ9NP66 347 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 PCDHB16Q9NRJ7 776 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 RBFOX1Q9NWB1 397 aaKnown RBP7.31□□□□□ -1.24
HDDC3-204ENST00000559834 HHLA2Q9UM44 414 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 GSTK1Q9Y2Q3 226 aa7.31□□□□□ -1.24
HDDC3-204ENST00000559834 WI2-2373I1.2A0A1W2PRP0 233 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 PSMB11A5LHX3 300 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 SIRPB1O00241 398 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 OR2H2O95918 312 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 CALCBP10092 127 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 ZNF44P15621 663 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 ZNF20P17024 532 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 HTR1FP30939 366 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 PTGFRP43088 359 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 GLIPR1P48060 266 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 SNU13P55769 128 aaKnown RBP7.3□□□□□ -1.24
HDDC3-204ENST00000559834 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 SCN1BQ07699 218 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 AESQ08117 197 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 TMED1Q13445 227 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 HLA-DRB5Q30154 266 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 TPTE2P1Q5T6R2 138 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 UTS2BQ765I0 119 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 SSX6Q7RTT6 188 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 KCTD20Q7Z5Y7 419 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 ZDHHC13Q8IUH4 622 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 RDH10Q8IZV5 341 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 LINC00482Q8N8I6 264 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 ZNF565Q8N9K5 539 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 CHST4Q8NCG5 386 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 BCAS4Q8TDM0 211 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 CHPT1Q8WUD6 406 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 RFKQ969G6 155 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 RPEQ96AT9 228 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 SPSB1Q96BD6 273 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 WWC2-AS2Q96NR7 200 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 ZFP57Q9NU63 452 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 OR6C3Q9NZP0 311 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 IL36RNQ9UBH0 155 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 POMPQ9Y244 141 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 DSCAML1Q8TD84 2053 aa7.3□□□□□ -1.24
HDDC3-204ENST00000559834 A0A087X0M5 115 aa7.29□□□□□ -1.24
HDDC3-204ENST00000559834 IGKV1-9A0A0C4DH69 117 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms