RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ZFP62Q8NB50 900 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 DLL3Q9NYJ7 618 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 MPPED1O15442 326 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 TRAF3IP2O43734 574 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 TNFAIP6P98066 277 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SLC25A31Q9H0C2 315 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 MMP26Q9NRE1 261 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SLC17A2O00624 439 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 ERVK-16P61578 105 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM24BQ8N5W8 94 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 TMEM229BQ8NBD8 167 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SPSB1Q96BD6 273 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 PIK3IP1Q96FE7 263 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 UQCC1Q9NVA1 299 aa9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 SF3B6Q9Y3B4 125 aaKnown RBP9.32□□□□□ -0.92
CARMIL3-202ENST00000559694 MEX3AA1L020 520 aaKnown RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF133P52736 654 aaPredicted RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 KISS1Q15726 138 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 CD200R1LQ6Q8B3 271 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 CDC20BQ86Y33 519 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 OR1S1Q8NH92 325 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 KIRREL1Q96J84 757 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 DOCK7Q96N67 2140 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 NUP210Q8TEM1 1887 aaPredicted RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 DENND4CQ5VZ89 1909 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 ABCD4O14678 606 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 PPIHO43447 177 aaKnown RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 ENSAO43768 121 aaKnown RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 THY1P04216 161 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 GSTP1P09211 210 aaKnown RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 RPL23AP62750 156 aaKnown RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 SSBP1Q04837 148 aaKnown RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 PPP1R1AQ13522 171 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 TBR1Q16650 682 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 OR52W1Q6IF63 320 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 PIP4P1Q86T03 277 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM185AQ8N0U4 392 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 ADPRHL1Q8NDY3 354 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 POC1BQ8TC44 478 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM234AQ9H0X4 552 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 UBTD1Q9HAC8 227 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 PLXNA2O75051 1894 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 KIAA1671Q9BY89 1806 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 A0A0U1RQK1 487 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 GNB3P16520 340 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 Q0VFX4 171 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 HFEQ30201 348 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 SMIM21Q3B7S5 101 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 C4orf17Q53FE4 359 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 TECTBQ96PL2 329 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 RSRP1Q9BUV0 290 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 TMPRSS5Q9H3S3 457 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF275Q9NSD4 429 aaPredicted RBP9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 LIPGQ9Y5X9 500 aa9.31□□□□□ -0.92
CARMIL3-202ENST00000559694 CTAG2O75638 210 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 MT-ND4LP03901 98 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 PGA4P0DJD7 388 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 PGA3P0DJD8 388 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 PSG4Q00888 419 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 RTP5Q14D33 572 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 NHLRC3Q5JS37 347 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 C9orf152Q5JTZ5 239 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 RPUSD3Q6P087 351 aaKnown RBP9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 TMEM182Q6ZP80 229 aaPredicted RBP9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 LFNGQ8NES3 379 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 OR10AD1Q8NGE0 317 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 SLC25A40Q8TBP6 338 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 MSL2Q9HCI7 577 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 TREM2Q9NZC2 230 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 MPDZO75970 2070 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 A0A1W2PPH5 198 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 MSTNO14793 375 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 PHOX2AO14813 284 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 F12P00748 615 aaPredicted RBP9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 SMIM6P0DI80 62 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 MICBQ29980 383 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 OSR2Q8N2R0 312 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 OR5M8Q8NGP6 311 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 SLX1AQ9BQ83 275 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF724A8MTY0 619 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 HPNP05981 417 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF266Q14584 549 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 HAGHQ16775 308 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM209BQ5JX69 171 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 PRSS35Q8N3Z0 413 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 OR2J1Q9GZK6 312 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 FRRS1LQ9P0K9 344 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 MMP24Q9Y5R2 645 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 IGF2RP11717 2491 aa9.3□□□□□ -0.92
CARMIL3-202ENST00000559694 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms