RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 C6orf201Q7Z4U5 140 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 MKXQ8IYA7 352 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 FCAMRQ8WWV6 532 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 ST8SIA4Q92187 359 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 RAB3CQ96E17 227 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 TMEM204Q9BSN7 226 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 PECRQ9BY49 303 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 MGAT4AQ9UM21 535 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 A0A0A6YYJ9 748 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 IFNA7P01567 189 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 CD3EP07766 207 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 CPT2P23786 658 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 CHATP28329 748 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 PRSS3P35030 304 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 PMELP40967 661 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 CD200P41217 278 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 MRPS10P82664 201 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 FCN2Q15485 313 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 BRICD5Q6PL45 260 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
RABGGTA-209ENST00000559551 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 SPRY3O43610 288 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 IGHV1-46P01743 117 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 PGA5P0DJD9 388 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 IGFBP2P18065 325 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 DUSP1P28562 367 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.484e-7■□□□□ 9.3
RABGGTA-209ENST00000559551 MST1LQ2TV78 715 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 SFRP4Q6FHJ7 346 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 WDR82Q6UXN9 313 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 ZCCHC24Q8N2G6 241 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 MRPS24Q96EL2 167 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 ELMOD3Q96FG2 381 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 PLK3Q9H4B4 646 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-209ENST00000559551 A0A1W2PPR1 153 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 ANKRD20A5PA0PJZ0 165 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 WNT9BO14905 357 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 BET1O15155 118 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 NHLRC3Q5JS37 347 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 GVQW1Q8N7I0 195 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 DYRK2Q92630 601 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 SULT4A1Q9BR01 284 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 WDR13Q9H1Z4 485 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 CLEC4MQ9H2X3 399 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 DPAGT1Q9H3H5 408 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 RNF115Q9Y4L5 304 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 I3L521 148 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 SCGNO76038 276 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 PRKACAP17612 351 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 ZNF81P51508 661 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 BAMBIQ13145 260 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 FAAP20Q6NZ36 180 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 Q6ZPA2 131 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 C15orf40Q8WUR7 153 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 ITLN1Q8WWA0 313 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 MEGF10Q96KG7 1140 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 HES4Q9HCC6 221 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 COPZ2Q9P299 210 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 ZNF222Q9UK12 451 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 CACNG2Q9Y698 323 aa12.07□□□□□ -0.48
RABGGTA-209ENST00000559551 PLSCR5A0PG75 271 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 SULT1C2O00338 296 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 LPLP06858 475 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 GSTP1P09211 210 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 EGR1P18146 543 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 SERPINF1P36955 418 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 GMFBP60983 142 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 NKPD1Q17RQ9 610 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 NKAPLQ5M9Q1 402 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 COMMD7Q86VX2 200 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 TGIF2LYQ8IUE0 185 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 FAM58AQ8N1B3 248 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 TOMM5Q8N4H5 51 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 OR4D10Q8NGI6 311 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 OR51J1Q9H342 316 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 UBQLN2Q9UHD9 624 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 KIAA2026Q5HYC2 2103 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 CYB5AP00167 134 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 ACAA1P09110 424 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 Q6P435 159 aa12.06□□□□□ -0.48
RABGGTA-209ENST00000559551 TRAPPC6BQ86SZ2 158 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms