RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 S100A13Q99584 98 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 GFI1Q99684 422 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 UQCC2Q9BRT2 126 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 SLITRK2Q9H156 845 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 EXOSC4Q9NPD3 245 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 A0A1W2PP11 408 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 TRIM64CA6NLI5 447 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 SIRPB1O00241 398 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 FSHBP01225 129 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 FAM157CP0CG43 387 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 SRD5A1P18405 259 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 CALRP27797 417 aaKnown RBP16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 SCN1BQ07699 218 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 SLC22A6Q4U2R8 563 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 KLF17Q5JT82 389 aaPredicted RBP16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 C1orf100Q5SVJ3 147 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 GLT8D1Q68CQ7 371 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 OR4S1Q8NGB4 309 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 OR4M1Q8NGD0 313 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 FOXRED1Q96CU9 486 aaPredicted RBP16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 DMRTB1Q96MA1 342 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 C19orf12Q9NSK7 152 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 AK6Q9Y3D8 172 aaKnown RBP16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 KIAA2026Q5HYC2 2103 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 DSCAML1Q8TD84 2053 aa16.72■□□□□ 0.27
TSPAN3-207ENST00000559494 A0A0G2JK05 382 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 DEGS1O15121 323 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 CSTBP04080 98 aaKnown RBP16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 SMIM18P0DKX4 95 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 MMP9P14780 707 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 SERPINA2P20848 420 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 GALP22466 123 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 GABRR1P24046 479 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 PIGYQ3MUY2 71 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 AWAT2Q6E213 333 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 OR8H2Q8N162 312 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 OSR2Q8N2R0 312 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 OR5D13Q8NGL4 314 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 NANPQ8TBE9 248 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 TBC1D15Q8TC07 691 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 UPRTQ96BW1 309 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 WDFY2Q96P53 400 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 CHST6Q9GZX3 395 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 SIRPDQ9H106 197 aa16.71■□□□□ 0.27
TSPAN3-207ENST00000559494 TRBV23-1A0A0A0MS06 115 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 SHISA3A0PJX4 238 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 ZNF780AO75290 641 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 ZNF44P15621 663 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 OR3A1P47881 315 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 RPL31P62899 125 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 IL13RA2Q14627 380 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TBX15Q96SF7 602 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 ZNF581Q9P0T4 197 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 ST3GAL6Q9Y274 331 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TRAV1-2A0A0B4J238 106 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 A0A1W2PQ09 198 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 SLC33A1O00400 549 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TOX4O94842 621 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 GPR176Q14439 515 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 GRK1Q15835 563 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 C22orf42Q6IC83 251 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 FAM185AQ8N0U4 392 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TEX29Q8N6K0 151 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 PCGF1Q9BSM1 259 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 OR51E2Q9H255 320 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 PCDHB16Q9NRJ7 776 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TXNL4BQ9NX01 149 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 ONECUT1Q9UBC0 465 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 STUB1Q9UNE7 303 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 KPTNQ9Y664 436 aa16.7■□□□□ 0.26
TSPAN3-207ENST00000559494 TRAV24A0A0B4J272 114 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 MGST3O14880 152 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 GTF2F2P13984 249 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 CD36P16671 472 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 JUNBP17275 347 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 FGF9P31371 208 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 RBM11P57052 281 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 RIPPLY3P57055 190 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 METTL11BQ5VVY1 283 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 GDPD3Q7L5L3 318 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 Q8N7P7 452 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 CHST4Q8NCG5 386 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 TMEM104Q8NE00 496 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 PPP1R35Q8TAP8 253 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 SLC25A28Q96A46 364 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 BANF2Q9H503 90 aa16.69■□□□□ 0.26
TSPAN3-207ENST00000559494 GEMIN2O14893 280 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 SLC22A1O15245 554 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 IGHV4-38-2P0DP08 117 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 HTR2CP28335 458 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 EDDM3BP56851 147 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 EDDM3AQ14507 147 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 METAP1DQ6UB28 335 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 PRIMA1Q86XR5 153 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 KIR3DL3Q8N743 410 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 TPRX1Q8N7U7 411 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 PPA2Q9H2U2 334 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms