RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 FAM58AQ8N1B3 248 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 CANT1Q8WVQ1 401 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 ASB9Q96DX5 294 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 CHST5Q9GZS9 411 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 ADGRL4Q9HBW9 690 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 ZMAT5Q9UDW3 170 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 GLS2Q9UI32 602 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 PCDHGB5Q9Y5G0 923 aa12.88□□□□□ -0.35
CDC42BPB-205ENST00000559245 TRBV2A0A0J9YWF9 115 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 BUB1B-PAK6H3BSN5 160 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 SIRPB1O00241 398 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 TOR1AO14656 332 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 ENTPD6O75354 484 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CALCBP10092 127 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 PRKACAP17612 351 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 BCL3P20749 454 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CD34P28906 385 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 MYCNOSP40205 109 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 MNDAP41218 407 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CRISP1P54107 249 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CATSPERDQ86XM0 798 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 YIPF7Q8N8F6 280 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CORO2AQ92828 525 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CREB3L1Q96BA8 519 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CCDC124Q96CT7 223 aaKnown RBP12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 CLN6Q9NWW5 311 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 TAS2R3Q9NYW6 316 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 MOB4Q9Y3A3 225 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 HSPE1-MOB4S4R3N1 261 aa12.87□□□□□ -0.35
CDC42BPB-205ENST00000559245 NUDT19A8MXV4 375 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 H0YHG0 523 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 LY6LH3BQJ8 138 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 CYB5AP00167 134 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 SERPINA3P01011 423 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 LMO1P25800 156 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 OR3A4PP47883 348 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 ATP1B3P54709 279 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 CDC42P60953 191 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 KPNB1Q14974 876 aaKnown RBP12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 CCDC144NLQ6NUI1 221 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 CHPT1Q8WUD6 406 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 TFAP2CQ92754 450 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 NSL1Q96IY1 281 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 P2RX4Q99571 388 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 ZFP57Q9NU63 452 aa12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-205ENST00000559245 FUOMA2VDF0 154 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 OOSP1A8MZH6 123 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 M0R129 80 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 KRT8P05787 483 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 FAM106CPP0CH98 169 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 T-ENOLP0DO92 83 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 SLC6A1P30531 599 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 GLIPR1P48060 266 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 POU3F4P49335 361 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 RBP2P50120 134 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 PRRX1P54821 245 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 AESQ08117 197 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 BNIP1Q12981 228 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 PTGES3Q15185 160 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 ADI1Q9BV57 179 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
CDC42BPB-205ENST00000559245 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 AQP12BA6NM10 295 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 EBAG9O00559 213 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 SH2D1BO14796 132 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 RAMP3O60896 148 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 OR2H2O95918 312 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 PTGFRP43088 359 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 NKAPLQ5M9Q1 402 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 UTF1Q5T230 341 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 AADACL4Q5VUY2 407 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 NXNL2Q5VZ03 156 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 THNSL2Q86YJ6 484 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 AQP12AQ8IXF9 295 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 TCEANCQ8N8B7 351 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 CCDC54Q8NEL0 328 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 DNAAF1Q8NEP3 725 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 OR4D6Q8NGJ1 314 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 DNAJC9Q8WXX5 260 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 C10orf35Q96D05 121 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 TBX5Q99593 518 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 PRRG3Q9BZD7 231 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 GSTK1Q9Y2Q3 226 aa12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 LSM4Q9Y4Z0 139 aaKnown RBP12.84□□□□□ -0.35
CDC42BPB-205ENST00000559245 A0A087X0M5 115 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 A0A1B0GX30 115 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 ODAMA1E959 279 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A18PA6NE21 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A16PA6NEW6 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A20PA6NIJ5 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms