RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TMEM200BQ69YZ2 307 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 ASCL4Q6XD76 172 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 ZNF367Q7RTV3 350 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 LRRTM1Q86UE6 522 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 PHC2Q8IXK0 858 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 SPARTQ8N0X7 666 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 MUL1Q969V5 352 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 NR1H4Q96RI1 486 aaPredicted RBP15.36■□□□□ 0.05
CASC4-209ENST00000559222 ISYNA1Q9NPH2 558 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 ESM1Q9NQ30 184 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 FOXJ3Q9UPW0 622 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 KPTNQ9Y664 436 aa15.36■□□□□ 0.05
CASC4-209ENST00000559222 HTR3BO95264 441 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 GABRR1P24046 479 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 RPL31P62899 125 aaKnown RBP15.35■□□□□ 0.05
CASC4-209ENST00000559222 SCN1BQ07699 218 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 KRTAP24-1Q3LI83 254 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 SPIN3Q5JUX0 258 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 CEACAM19Q7Z692 300 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 OR8H2Q8N162 312 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 PNKDQ8N490 385 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 JAGN1Q8N5M9 183 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 TEX29Q8N6K0 151 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 KIR3DL3Q8N743 410 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 SIGLECL1Q8N7X8 197 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 OR4D6Q8NGJ1 314 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 SNX22Q96L94 193 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 FAM234AQ9H0X4 552 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 EXOSC4Q9NPD3 245 aaKnown RBP15.35■□□□□ 0.05
CASC4-209ENST00000559222 CKLFQ9UBR5 152 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 ING4Q9UNL4 249 aa15.35■□□□□ 0.05
CASC4-209ENST00000559222 TRBV23-1A0A0A0MS06 115 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 A0A1W2PRD5 423 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 A0A1W2PRF3 423 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 A0A1W2PRM7 423 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 RNASEK-C17orf49H0YIS7 233 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 MTNR1BP49286 362 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 EDDM3BP56851 147 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 FABP5Q01469 135 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 GPR50Q13585 617 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 RSU1Q15404 277 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 GRK1Q15835 563 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 ELP2Q6IA86 826 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 HCP5Q6MZN7 132 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 FIP1L1Q6UN15 594 aaKnown RBP15.34■□□□□ 0.05
CASC4-209ENST00000559222 BPIFB2Q8N4F0 458 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 C11orf42Q8N5U0 333 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 MS4A15Q8N5U1 240 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 TNFRSF14Q92956 283 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 C1orf147Q96MC9 270 aaPredicted RBP15.34■□□□□ 0.05
CASC4-209ENST00000559222 GFI1Q99684 422 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 PPA2Q9H2U2 334 aa15.34■□□□□ 0.05
CASC4-209ENST00000559222 SEBOXQ9HB31 216 aaPredicted RBP15.34■□□□□ 0.05
CASC4-209ENST00000559222 SLC33A1O00400 549 aaPredicted RBP15.33■□□□□ 0.04
CASC4-209ENST00000559222 HSPB6O14558 160 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 TCF21O43680 179 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 UCHL1P09936 223 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 ZNF44P15621 663 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 SERPINA2P20848 420 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 MAPK3P27361 379 aaPredicted RBP15.33■□□□□ 0.04
CASC4-209ENST00000559222 DLX6P56179 175 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 Q8NFD4 153 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 CPNE2Q96FN4 548 aaPredicted RBP15.33■□□□□ 0.04
CASC4-209ENST00000559222 MS4A7Q9GZW8 240 aaPredicted RBP15.33■□□□□ 0.04
CASC4-209ENST00000559222 KCNK15Q9H427 330 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 ING3Q9NXR8 418 aa15.33■□□□□ 0.04
CASC4-209ENST00000559222 MRPS28Q9Y2Q9 187 aaKnown RBP15.33■□□□□ 0.04
CASC4-209ENST00000559222 IGHV1-69DA0A0B4J2H0 117 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 A0A0G2JK05 382 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 SH2D1BO14796 132 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 IGHV1-69P01742 117 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 DEFB112Q30KQ8 113 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 SLC22A6Q4U2R8 563 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 GPR157Q5UAW9 335 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 GDPD3Q7L5L3 318 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 ZDHHC22Q8N966 263 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 OR51T1Q8NGJ9 327 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 COQ2Q96H96 371 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 DUX5Q96PT3 197 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 METTL9Q9H1A3 318 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 IL36GQ9NZH8 169 aa15.32■□□□□ 0.04
CASC4-209ENST00000559222 TRAV24A0A0B4J272 114 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 M0R1W7 72 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 LMO1P25800 156 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 RBM11P57052 281 aaKnown RBP15.31■□□□□ 0.04
CASC4-209ENST00000559222 HILS1P60008 231 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 ATXN7L3Q14CW9 347 aaPredicted RBP15.31■□□□□ 0.04
CASC4-209ENST00000559222 HSD17B12Q53GQ0 312 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 UBE2UQ5VVX9 321 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 ZNF773Q6PK81 442 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 GLIPR1L1Q6UWM5 242 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 C9orf139Q6ZV77 190 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 YTHDF1Q9BYJ9 559 aaKnown RBP15.31■□□□□ 0.04
CASC4-209ENST00000559222 RHOFQ9HBH0 211 aa15.31■□□□□ 0.04
CASC4-209ENST00000559222 SHISA3A0PJX4 238 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 DEGS1O15121 323 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 MRPS14O60783 128 aaKnown RBP15.3■□□□□ 0.04
CASC4-209ENST00000559222 PSMB9P28065 219 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 GABRA5P31644 462 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms