RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 COQ2Q96H96 371 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 MED30Q96HR3 178 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 GPER1Q99527 375 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 CHST6Q9GZX3 395 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 OR51E2Q9H255 320 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 CKLFQ9UBR5 152 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 MRPS28Q9Y2Q9 187 aaKnown RBP9.41□□□□□ -0.9
SNX1-204ENST00000559061 MEX3AA1L020 520 aaKnown RBP9.4□□□□□ -0.9
SNX1-204ENST00000559061 SIRPB1O00241 398 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 SLC22A1O15245 554 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 JUNBP17275 347 aaPredicted RBP9.4□□□□□ -0.9
SNX1-204ENST00000559061 NDUFB7P17568 137 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 SERPINA2P20848 420 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 GADD45AP24522 165 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 CALRP27797 417 aaKnown RBP9.4□□□□□ -0.9
SNX1-204ENST00000559061 TGFBR1P36897 503 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 RBM11P57052 281 aaKnown RBP9.4□□□□□ -0.9
SNX1-204ENST00000559061 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 PLA2G7Q13093 441 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 UNC119Q13432 240 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 LRRC10Q5BKY1 277 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 SIGIRRQ6IA17 410 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 C22orf42Q6IC83 251 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 OR8H2Q8N162 312 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 TPRX1Q8N7U7 411 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 NKAIN3Q8N8D7 197 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 OR4M1Q8NGD0 313 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 TBC1D15Q8TC07 691 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 THRSPQ92748 146 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 TNFRSF14Q92956 283 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 UQCC2Q9BRT2 126 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 RHOFQ9HBH0 211 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 TXNL4BQ9NX01 149 aaKnown RBP9.4□□□□□ -0.9
SNX1-204ENST00000559061 CDC42EP3Q9UKI2 254 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 ING4Q9UNL4 249 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 AK6Q9Y3D8 172 aaKnown RBP9.4□□□□□ -0.9
SNX1-204ENST00000559061 AUP1Q9Y679 476 aa9.4□□□□□ -0.9
SNX1-204ENST00000559061 C2CD3Q4AC94 2353 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 A0A0A6YYD4 124 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 GEMIN2O14893 280 aaKnown RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 MAGEB3O15480 346 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 HTR3BO95264 441 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 ECDO95905 644 aaPredicted RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 CYB5AP00167 134 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 CHRM2P08172 466 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 FAM157CP0CG43 387 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 CCL3L1P16619 93 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 GALP22466 123 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 FGF9P31371 208 aaPredicted RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 IL13RA2Q14627 380 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 RSU1Q15404 277 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 CHRFAM7AQ494W8 412 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 SLC22A6Q4U2R8 563 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 UTF1Q5T230 341 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 TMEM200BQ69YZ2 307 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 ASCC1Q8N9N2 400 aaKnown RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 H1FXQ92522 213 aaKnown RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 SNX22Q96L94 193 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 PPA2Q9H2U2 334 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 BANF2Q9H503 90 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 TCF7L1Q9HCS4 588 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 EXOSC4Q9NPD3 245 aaKnown RBP9.39□□□□□ -0.91
SNX1-204ENST00000559061 LPAR3Q9UBY5 353 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 STUB1Q9UNE7 303 aa9.39□□□□□ -0.91
SNX1-204ENST00000559061 A0A087WXM4 84 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 TRAV1-2A0A0B4J238 106 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 SMIM30A4D0T7 59 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 TMEM14DPA8MWL7 114 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 GPR37O15354 613 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 CFPP27918 469 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 CLDN12P56749 244 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 ARF6P62330 175 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 SRSF2Q01130 221 aaKnown RBP9.38□□□□□ -0.91
SNX1-204ENST00000559061 KLRD1Q13241 179 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 P2RY14Q15391 338 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 CD276Q5ZPR3 534 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 RUSC1-AS1Q66K80 236 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 OSR2Q8N2R0 312 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 PLPPR1Q8TBJ4 325 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 CPNE2Q96FN4 548 aaPredicted RBP9.38□□□□□ -0.91
SNX1-204ENST00000559061 Q96M66 194 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 ZNF48Q96MX3 618 aaPredicted RBP9.38□□□□□ -0.91
SNX1-204ENST00000559061 NR1H4Q96RI1 486 aaPredicted RBP9.38□□□□□ -0.91
SNX1-204ENST00000559061 CENPOQ9BU64 300 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 BEX2Q9BXY8 128 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 METTL9Q9H1A3 318 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 IFT22Q9H7X7 185 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 RCC2Q9P258 522 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms