RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 MELTFP08582 738 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 RPSAP08865 295 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 CGB3P0DN86 165 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 CGB7P0DN87 165 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 JUNBP17275 347 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 PRKACAP17612 351 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 PRTN3P24158 256 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 PIGYQ3MUY2 71 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 Q499Y3 187 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 FBLN7Q53RD9 439 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 ELP2Q6IA86 826 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 LRRTM1Q86UE6 522 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 RTN4RL2Q86UN3 420 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 SAXO1Q8IYX7 474 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 OR8H2Q8N162 312 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 PXT1Q8NFP0 134 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 OR4D6Q8NGJ1 314 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 OR5D14Q8NGL3 314 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 CNBD2Q96M20 576 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 FAM234AQ9H0X4 552 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 GSTK1Q9Y2Q3 226 aa10.3□□□□□ -0.76
RABGGTA-207ENST00000558936 SHISA3A0PJX4 238 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 TMEM89A2RUT3 159 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 H0YHG0 523 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 CLDN34H7C241 214 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 M0R1W7 72 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 SIRPB1O00241 398 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 CHRM2P08172 466 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 FSTP19883 344 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 RAB3AP20336 220 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 RPL31P62899 125 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 SPHARQ15513 63 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 SSX1Q16384 188 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 TAF9Q16594 264 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 YIF1BQ5BJH7 314 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 FAM185AQ8N0U4 392 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 ZSCAN4Q8NAM6 433 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 OR51T1Q8NGJ9 327 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 PLPPR1Q8TBJ4 325 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 PIFOQ8TCI5 191 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 SNX22Q96L94 193 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 NOX4Q9NPH5 578 aa10.29□□□□□ -0.76
RABGGTA-207ENST00000558936 TRBV23-1A0A0A0MS06 115 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 RNASE1P07998 156 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 HCKP08631 526 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 TGFBR2P37173 567 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 VHLP40337 213 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 PTGFRP43088 359 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 GLIPR1P48060 266 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 COMPP49747 757 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 BMXP51813 675 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 CAPZA1P52907 286 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 RPS25P62851 125 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 ACTG1P63261 375 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 TPBGQ13641 420 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 C17orf58Q2M2W7 97 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 FAM53AQ6NSI3 398 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 C5orf24Q7Z6I8 188 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 LHFPL4Q7Z7J7 247 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 CMTM4Q8IZR5 234 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 ASCC1Q8N9N2 400 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 HAVCR2Q8TDQ0 301 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 TNFAIP8L1Q8WVP5 186 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 CHIAQ9BZP6 476 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 KCNK15Q9H427 330 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 ZMAT3Q9HA38 289 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 RAB26Q9ULW5 256 aa10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 RRP15Q9Y3B9 282 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-207ENST00000558936 A0A1W2PQ09 198 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 FAM90A8PA6NJQ4 464 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 NPFFO15130 113 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 DENRO43583 198 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 TMEM225BP0DP42 221 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 BDKRB2P30411 391 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 SAA4P35542 130 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 IER3P46695 156 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 BDH1Q02338 343 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 AESQ08117 197 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 ACSM3Q53FZ2 586 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 SPIN3Q5JUX0 258 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 DDI2Q5TDH0 399 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 LIPKQ5VXJ0 399 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 SIGIRRQ6IA17 410 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 ZNF782Q6ZMW2 699 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 Q6ZPA2 131 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 PRSS48Q7RTY5 328 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 SATL1Q86VE3 508 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 TMEM104Q8NE00 496 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 GCDHQ92947 438 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 PPA2Q9H2U2 334 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 VCXQ9H320 206 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 TMEM138Q9NPI0 162 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 ZNRD1Q9P1U0 126 aa10.27□□□□□ -0.77
RABGGTA-207ENST00000558936 TRAV39A0A0B4J263 110 aa10.26□□□□□ -0.77
RABGGTA-207ENST00000558936 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
RABGGTA-207ENST00000558936 MYL12BO14950 172 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms