RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TMED4Q7Z7H5 227 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 MKXQ8IYA7 352 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 OR5H2Q8NGV7 314 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 LILRB4Q8NHJ6 448 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 TERB2Q8NHR7 220 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 HIST1H2AAQ96QV6 131 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 OR2A7Q96R45 310 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF701Q9NV72 531 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-207ENST00000558763 MGAT4CQ9UBM8 478 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 COL12A1Q99715 3063 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 A0A1B0GWJ7 208 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 H0YL77 283 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 SDCBPO00560 298 aaPredicted RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 OR7C1O76099 320 aaPredicted RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 FUT3P21217 361 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ZBTB25P24278 435 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 H2BFSP57053 126 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 TAS2R46P59540 309 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ERVK11-1P61568 191 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF154Q13106 437 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 Q6ZR03 302 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ADAD2Q8NCV1 583 aaKnown RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 OR2AK2Q8NG84 335 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ZFAND1Q8TCF1 268 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 MARCH1Q8TCQ1 289 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 CMSS1Q9BQ75 279 aaKnown RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 ADAT1Q9BUB4 502 aaKnown RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 LIME1Q9H400 295 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 C5orf66Q9H5L9 145 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 PURGQ9UJV8 347 aaKnown RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 GPR132Q9UNW8 380 aa11□□□□□ -0.65
SMAD3-207ENST00000558763 USP9XQ93008 2570 aaPredicted RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 CHD3Q12873 2000 aaKnown RBP11□□□□□ -0.65
SMAD3-207ENST00000558763 LRP5LA4QPB2 252 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 TRAPPC2LH3BP13 241 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 IFNA6P05013 189 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 C4orf46Q504U0 113 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 MBNL2Q5VZF2 373 aaKnown RBP10.99□□□□□ -0.65
SMAD3-207ENST00000558763 CCDC107Q8WV48 283 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 ITLN2Q8WWU7 325 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-207ENST00000558763 TMEM230Q96A57 120 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 BCL2L14Q9BZR8 327 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 ANXA10Q9UJ72 324 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 UBE2QL1A1L167 161 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 FAM221AA4D161 298 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 C16orf97H3BN30 126 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 SELEP16581 610 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 TUBG1P23258 451 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
SMAD3-207ENST00000558763 PPP1R1AQ13522 171 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 SNTB1Q13884 538 aaKnown RBP10.99□□□□□ -0.65
SMAD3-207ENST00000558763 CDK10Q15131 360 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 MPV17LQ2QL34 196 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 LY6G6FQ5SQ64 297 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 DCAF12L2Q5VW00 463 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 C9orf62Q8N4C0 152 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 SCCPDHQ8NBX0 429 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 OR8G5Q8NG78 346 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 MICU1Q9BPX6 476 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 PPA2Q9H2U2 334 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 KCNJ16Q9NPI9 418 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 TUBG2Q9NRH3 451 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 EHFQ9NZC4 300 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 EDARQ9UNE0 448 aa10.99□□□□□ -0.65
SMAD3-207ENST00000558763 NOP16Q9Y3C1 178 aaKnown RBP10.99□□□□□ -0.65
SMAD3-207ENST00000558763 OR5H14A6NHG9 310 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 PRSS44E7EML9 344 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 NAPSAO96009 420 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 GIPP09681 153 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-207ENST00000558763 PRKACAP17612 351 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 DUSP1P28562 367 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 NPY4RP50391 375 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF83P51522 516 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 NKX6-1P78426 367 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-207ENST00000558763 MRPS15P82914 257 aaKnown RBP10.98□□□□□ -0.65
SMAD3-207ENST00000558763 FAHD2BQ6P2I3 314 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-207ENST00000558763 C11orf53Q8IXP5 236 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 FAHD2AQ96GK7 314 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 HYLS1Q96M11 299 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 C12orf4Q9NQ89 552 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 DECR2Q9NUI1 292 aa10.98□□□□□ -0.65
SMAD3-207ENST00000558763 TRAV24A0A0B4J272 114 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 RGS13O14921 159 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 PGA5P0DJD9 388 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 FPR2P25090 351 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 DHODHQ02127 395 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 IL13RA2Q14627 380 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 CHRFAM7AQ494W8 412 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 LYG2Q86SG7 212 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 FAM58AQ8N1B3 248 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 OR2T35Q8NGX2 323 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 RNASE6Q93091 150 aaKnown RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 NRIP2Q9BQI9 281 aa10.97□□□□□ -0.65
SMAD3-207ENST00000558763 RTBDNQ9BSG5 229 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-207ENST00000558763 IFT22Q9H7X7 185 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms