RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 INPP5EQ9NRR6 644 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 DHDHQ9UQ10 334 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 RPL36Q9Y3U8 105 aaKnown RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 LINC00312Q9Y6C7 94 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 FAM172BPA6NC97 362 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 TMEM212A6NML5 194 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 SH2D1BO14796 132 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 SULT1B1O43704 296 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 KDM4BO94953 1096 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 CLIC3O95833 236 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 CCDC159P0C7I6 412 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 TMEM225BP0DP42 221 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
HERC1-202ENST00000558324 P2RX3P56373 397 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 DEFA6Q01524 100 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 IL18R1Q13478 541 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 AANATQ16613 207 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 PRAMEF5Q5TYX0 476 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 CRIP3Q6Q6R5 217 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 TMEM219Q86XT9 240 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 OR2T6Q8NHC8 308 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 NDNFQ8TB73 568 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 PIFOQ8TCI5 191 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 ZNF649Q9BS31 505 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 NPFFR1Q9GZQ6 430 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 MMP27Q9H306 513 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 RAB18Q9NP72 206 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 SMPD3Q9NY59 655 aaPredicted RBP9.64□□□□□ -0.87
HERC1-202ENST00000558324 FBLN5Q9UBX5 448 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 FOXJ3Q9UPW0 622 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 TBL2Q9Y4P3 447 aaKnown RBP9.64□□□□□ -0.87
HERC1-202ENST00000558324 PCDHGB5Q9Y5G0 923 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 SESN1Q9Y6P5 492 aa9.64□□□□□ -0.87
HERC1-202ENST00000558324 MEGF8Q7Z7M0 2845 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 IGHV2-26A0A0B4J1V2 119 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 F2RL2O00254 374 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 HSPB6O14558 160 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 WBP4O75554 376 aaKnown RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 MMP23AO75900 390 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 MT-ND2P03891 347 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 LIMS3P0CW19 117 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 LIMS4P0CW20 117 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 VSIG10L2P0DP72 767 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 GLIPR1P48060 266 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 EFNB2P52799 333 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 SLC34A1Q06495 639 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 AESQ08117 197 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 MRPL28Q13084 256 aaKnown RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 HABP2Q14520 560 aaPredicted RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 ATXN7L3Q14CW9 347 aaPredicted RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 KISS1Q15726 138 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 ZSCAN26Q16670 478 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 KLHL22Q53GT1 634 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 OR2G6Q5TZ20 316 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 XAF1Q6GPH4 301 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 BAIAP2L2Q6UXY1 529 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 Q6ZTK2 550 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 SATL1Q86VE3 508 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 SERPINA12Q8IW75 414 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 KLHDC1Q8N7A1 406 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 OR11H6Q8NGC7 330 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 OR5D14Q8NGL3 314 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 CNIH3Q8TBE1 160 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 MALSU1Q96EH3 234 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 NR1H4Q96RI1 486 aaPredicted RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 CLEC7AQ9BXN2 247 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 FAM192AQ9GZU8 254 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 SEBOXQ9HB31 216 aaPredicted RBP9.63□□□□□ -0.87
HERC1-202ENST00000558324 TCF19Q9Y242 345 aa9.63□□□□□ -0.87
HERC1-202ENST00000558324 TRGV10A0A0A0MS01 117 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 MEGF11A6BM72 1044 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 VGLL3A8MV65 326 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 KIR2DS4P43632 304 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 ETV1P50549 477 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 ZP1P60852 638 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 C2orf68Q2NKX9 166 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 ZNF691Q5VV52 312 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 CCBE1Q6UXH8 406 aaPredicted RBP9.62□□□□□ -0.87
HERC1-202ENST00000558324 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 SAXO1Q8IYX7 474 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 OR51A2Q8NGJ7 313 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 CYGBQ8WWM9 190 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 RGP1Q92546 391 aaPredicted RBP9.62□□□□□ -0.87
HERC1-202ENST00000558324 GPER1Q99527 375 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 GAL3ST2Q9H3Q3 398 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 MRPS18AQ9NVS2 196 aaKnown RBP9.62□□□□□ -0.87
HERC1-202ENST00000558324 TAS2R4Q9NYW5 299 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 UBE2J1Q9Y385 318 aaPredicted RBP9.62□□□□□ -0.87
HERC1-202ENST00000558324 PKD1L1Q8TDX9 2849 aa9.62□□□□□ -0.87
HERC1-202ENST00000558324 A0A0G2JK05 382 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 ODAMA1E959 279 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 A6NDX4 124 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 SLC33A1O00400 549 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms