RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 TRAPPC2LH3BP13 241 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 GEMIN2O14893 280 aaKnown RBP7.17□□□□□ -1.26
SPG11-209ENST00000558253 SPRY1O43609 319 aaPredicted RBP7.17□□□□□ -1.26
SPG11-209ENST00000558253 ANGPTL7O43827 346 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 SNAPINO95295 136 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 KNG1P01042 644 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 TK1P04183 234 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 CD79AP11912 226 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 SELEP16581 610 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 ANOS1P23352 680 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 APLNRP35414 380 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 MAGEA5P43359 124 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 MEOX1P50221 254 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 PIGPP57054 158 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 PRDX4Q13162 271 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 IL13RA2Q14627 380 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 IAH1Q2TAA2 248 aaPredicted RBP7.17□□□□□ -1.26
SPG11-209ENST00000558253 FBXW9Q5XUX1 488 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 UNQ6126/PRO20091Q6UXV3 157 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 TUSC5Q8IXB3 177 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 Q8IYB0 196 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 C1orf174Q8IYL3 243 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 FAM71E2Q8N5Q1 922 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 COMMD1Q8N668 190 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 ZNF611Q8N823 705 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 ARL11Q969Q4 196 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 BOD1Q96IK1 185 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 POM121L2Q96KW2 1035 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 CXorf58Q96LI9 332 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 SPIN2AQ99865 258 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 SPIN2BQ9BPZ2 258 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 SULT4A1Q9BR01 284 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 SMOC1Q9H4F8 434 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 ZNF442Q9H7R0 627 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 CALHM2Q9HA72 323 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 BARX1Q9HBU1 254 aaPredicted RBP7.17□□□□□ -1.26
SPG11-209ENST00000558253 RCC2Q9P258 522 aaKnown RBP7.17□□□□□ -1.26
SPG11-209ENST00000558253 NSG2Q9Y328 171 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 COL27A1Q8IZC6 1860 aaPredicted RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 BORCS7-ASMTA0A0B4J1R7 106 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 TRGV5A0A0B4J1U4 118 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 IGKV1-12A0A0C4DH73 117 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 C5orf49A4QMS7 147 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 H7C2Y5 167 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 K7EPK0 472 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 LRP3O75074 770 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 DEDDO75618 318 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 CDS2O95674 445 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 IGKV1D-12P01611 117 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 RPLP1P05386 114 aaKnown RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 ACAA1P09110 424 aaPredicted RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 PATE4P0C8F1 98 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 MMP9P14780 707 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 DUSP1P28562 367 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 FCGR2CP31995 323 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 RAB5CP51148 216 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 RAB1AP62820 205 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 GNG3P63215 75 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 SRYQ05066 204 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 IL24Q13007 206 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 BTN1A1Q13410 526 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 TMEM187Q14656 261 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 ATXN7L3Q14CW9 347 aaPredicted RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 HES3Q5TGS1 186 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 ALKBH2Q6NS38 261 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 ZNF585AQ6P3V2 769 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 SLC25A26Q70HW3 274 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 IL22RA1Q8N6P7 574 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 FGFBP3Q8TAT2 258 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 RTN4IP1Q8WWV3 396 aaPredicted RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 BCL2L2Q92843 193 aaPredicted RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 IL22RA2Q969J5 263 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 GMPPAQ96IJ6 420 aaPredicted RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 C18orf12Q96KH6 178 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 PRRX2Q99811 253 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 PAPOLGQ9BWT3 736 aaKnown RBP7.16□□□□□ -1.26
SPG11-209ENST00000558253 SLC5A7Q9GZV3 580 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 ZDHHC11Q9H8X9 412 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 BIN3Q9NQY0 253 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 MMP26Q9NRE1 261 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 CYTL1Q9NRR1 136 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 TREM2Q9NZC2 230 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 GSKIPQ9P0R6 139 aa7.16□□□□□ -1.26
SPG11-209ENST00000558253 SLC22A20A6NK97 555 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 CD300LBA8K4G0 201 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 FAM166BA8MTA8 275 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 TRDCB7Z8K6 153 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 F8W036 122 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 H0YIZ8 118 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 MASP2O00187 686 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 ADAP1O75689 374 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 SCO1O75880 301 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 OR7C1O76099 320 aaPredicted RBP7.15□□□□□ -1.26
SPG11-209ENST00000558253 NAPSAO96009 420 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 SFTPBP07988 381 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 HOXB5P09067 269 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 WNT2P09544 360 aa7.15□□□□□ -1.26
SPG11-209ENST00000558253 PI3P19957 117 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms