RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 OR12D1P0DN82 309 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 HPCAL1P37235 193 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 GSK3BP49841 420 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 EMDP50402 254 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 CRYBA2P53672 197 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 ATP1B3P54709 279 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 PLP1P60201 277 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 RPL27P61353 136 aaKnown RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 RAB11AP62491 216 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 GNB2P62879 340 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 TGFBR3Q03167 851 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 CRMP1Q14194 572 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 ATXN7L3Q14CW9 347 aaPredicted RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 RAB11BQ15907 218 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 FAM83EQ2M2I3 478 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 C15orf32Q32M92 178 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 SPANXN3Q5MJ09 141 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 DDI2Q5TDH0 399 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 STEAP4Q687X5 459 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 DEGS2Q6QHC5 323 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 C6orf89Q6UWU4 347 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 VTCN1Q7Z7D3 282 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 MARCH3Q86UD3 253 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 TMEM17Q86X19 198 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 MICU2Q8IYU8 434 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 FGFRL1Q8N441 504 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 GVQW1Q8N7I0 195 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 OR7G2Q8NG99 324 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 DLX4Q92988 240 aaPredicted RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 NEURL3Q96EH8 262 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 PAIP2Q9BPZ3 127 aaKnown RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 KLHDC3Q9BQ90 382 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 C20orf24Q9BUV8 137 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 KIFC1Q9BW19 673 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 COMMD4Q9H0A8 199 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 RANBP3Q9H6Z4 567 aaPredicted RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 PARVBQ9HBI1 364 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 FBXO6Q9NRD1 293 aaPredicted RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 EXD2Q9NVH0 621 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 MS4A12Q9NXJ0 267 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 ZNRD1Q9P1U0 126 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 SLC7A8Q9UHI5 535 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 PLLPQ9Y342 182 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 LRP2P98164 4655 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 IGHV1-69DA0A0B4J2H0 117 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 RS1O15537 224 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 ZNF254O75437 659 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 ZNF189O75820 626 aaPredicted RBP4.24□□□□□ -1.73
RTF1-204ENST00000558117 IGHV1-69P01742 117 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 HSMCR30P0CW71 290 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 ZNF14P17017 642 aaPredicted RBP4.24□□□□□ -1.73
RTF1-204ENST00000558117 IL12BP29460 328 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 GLRXP35754 106 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 BCAP31P51572 246 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 SLC7A2P52569 658 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 IRF8Q02556 426 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 RBBP4Q09028 425 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 TTLL9Q3SXZ7 439 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 TMEM176BQ3YBM2 270 aaPredicted RBP4.24□□□□□ -1.73
RTF1-204ENST00000558117 FAM74A3Q4VXF1 159 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 C9orf66Q5T8R8 295 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 SLX4IPQ5VYV7 408 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 APOOLQ6UXV4 268 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 NPSR1Q6W5P4 371 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 Q6ZR54 194 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 SSX9Q7RTT3 188 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 CMC1Q7Z7K0 106 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 MOB3BQ86TA1 216 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 SPICQ8N5J4 248 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 CCL17Q92583 94 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 TLCD1Q96CP7 247 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 CERS2Q96G23 380 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 TMEM109Q9BVC6 243 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 IL22Q9GZX6 179 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 NT5DC2Q9H857 520 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 MOB1AQ9H8S9 216 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 CAB39LQ9H9S4 337 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 NRN1Q9NPD7 142 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 MED4Q9NPJ6 270 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 PRR34Q9NV39 138 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 PSMC3IPQ9P2W1 217 aaPredicted RBP4.24□□□□□ -1.73
RTF1-204ENST00000558117 PITPNC1Q9UKF7 332 aa4.24□□□□□ -1.73
RTF1-204ENST00000558117 DSPPQ9NZW4 1301 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 SMCO3A2RU48 225 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 E5RI56 91 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 DLGAP1O14490 977 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 LSM1O15116 133 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 TAPBPO15533 448 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 MRPL33O75394 65 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 CLIC3O95833 236 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 GAPDHP04406 335 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 SNRPAP09012 282 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 WNT2P09544 360 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 C1GALT1C1LP0DN25 315 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 GSTM3P21266 225 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 SLC1A2P43004 574 aa4.23□□□□□ -1.73
RTF1-204ENST00000558117 RIDAP52758 137 aaKnown RBP4.23□□□□□ -1.73
RTF1-204ENST00000558117 RPS27AP62979 156 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms