RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 IGHV3OR15-7A0A075B7D8 119 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 RFPL4AA6NLU0 287 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 MCRIP1C9JLW8 97 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 C3orf80F5H4A9 247 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 RFPL4AL1F8VTS6 287 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 GABARAPH6UMI1 98 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 GSTZ1O43708 216 aaPredicted RBP14.15□□□□□ -0.14
SNX1-203ENST00000558040 CA11O75493 328 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 OR2H2O95918 312 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 PSG2P11465 335 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 MRPS15P82914 257 aaKnown RBP14.15□□□□□ -0.14
SNX1-203ENST00000558040 ARFRP1Q13795 201 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 HACD4Q5VWC8 232 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 ZNF787Q6DD87 383 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 SFRP4Q6FHJ7 346 aaPredicted RBP14.15□□□□□ -0.14
SNX1-203ENST00000558040 Q6P435 159 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 OR8H2Q8N162 312 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 NEK7Q8TDX7 302 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 ST8SIA4Q92187 359 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 YIPF5Q969M3 257 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 SEH1LQ96EE3 360 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 DCAF16Q9NXF7 216 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 EDARQ9UNE0 448 aa14.15□□□□□ -0.14
SNX1-203ENST00000558040 DSCAMO60469 2012 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 NKX6-3A6NJ46 265 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 SIRPB1O00241 398 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 RP2O75695 350 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 FSTL3O95633 263 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 LPLP06858 475 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 CD3GP09693 182 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 COL8A2P25067 703 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 LMO1P25800 156 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 PRDX2P32119 198 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 HOXA4Q00056 320 aaPredicted RBP14.14□□□□□ -0.15
SNX1-203ENST00000558040 PAN3Q58A45 887 aaKnown RBP14.14□□□□□ -0.15
SNX1-203ENST00000558040 FAM201AQ5SY85 155 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 TRIQKQ629K1 86 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 C16orf87Q6PH81 154 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 SUMF2Q8NBJ7 301 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 OR5T2Q8NGG2 359 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 TIMD4Q96H15 378 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 DPCDQ9BVM2 203 aaPredicted RBP14.14□□□□□ -0.15
SNX1-203ENST00000558040 CHODLQ9H9P2 273 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 PALMDQ9NP74 551 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 MYOZ1Q9NP98 299 aaPredicted RBP14.14□□□□□ -0.15
SNX1-203ENST00000558040 ZNF581Q9P0T4 197 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 KCNK7Q9Y2U2 307 aa14.14□□□□□ -0.15
SNX1-203ENST00000558040 LRRK2Q5S007 2527 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 IGKV1D-17A0A075B6S4 117 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 TRAV24A0A0B4J272 114 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 SLC33A1O00400 549 aaPredicted RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 MDH2P40926 338 aaKnown RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 CBX5P45973 191 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 GABRA2P47869 451 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 INPP1P49441 399 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 CEBPDP49716 269 aaPredicted RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 BTG1P62324 171 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 DGCR2P98153 550 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 DCTN2Q13561 401 aaKnown RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 RNASE12Q5GAN4 147 aaKnown RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 STUMQ69YW2 141 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 C19orf18Q8NEA5 215 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 DEFB108BQ8NET1 73 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 ANGPTL6Q8NI99 470 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 PPP1R35Q8TAP8 253 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 GCDHQ92947 438 aaPredicted RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 SDHCQ99643 169 aaPredicted RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 SULT4A1Q9BR01 284 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 THAP7Q9BT49 309 aaPredicted RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 FAAP24Q9BTP7 215 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 DNTTIP1Q9H147 329 aa14.13□□□□□ -0.15
SNX1-203ENST00000558040 BARX1Q9HBU1 254 aaPredicted RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 SPTAN1Q13813 2472 aaKnown RBP14.13□□□□□ -0.15
SNX1-203ENST00000558040 UBE2QL1A1L167 161 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 LYNX1G3V0Z9 82 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 HSPB6O14558 160 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 NDUFA2O43678 99 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 UPK1BO75841 260 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 RBBP9O75884 186 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 ZNF205O95201 554 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 LYNX1P0DP58 116 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 PTHLHP12272 177 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 RBMXP38159 391 aaKnown RBP14.12□□□□□ -0.15
SNX1-203ENST00000558040 KCNJ3P48549 501 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 ACTBP60709 375 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 ACTG1P63261 375 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 COL10A1Q03692 680 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 SSBP1Q04837 148 aaKnown RBP14.12□□□□□ -0.15
SNX1-203ENST00000558040 SHEQ5VZ18 495 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 DNM1P46Q6ZS02 220 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 TRAPPC6BQ86SZ2 158 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 RTN4RL2Q86UN3 420 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 ZNF561Q8N587 486 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 CD177Q8N6Q3 437 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 ASCC1Q8N9N2 400 aaKnown RBP14.12□□□□□ -0.15
SNX1-203ENST00000558040 OR52I2Q8NH67 350 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 GPX8Q8TED1 209 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 RAB1CQ92928 201 aa14.12□□□□□ -0.15
SNX1-203ENST00000558040 CMSS1Q9BQ75 279 aaKnown RBP14.12□□□□□ -0.15
SNX1-203ENST00000558040 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms