RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 HEPN1Q6WQI6 88 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 TRAPPC6BQ86SZ2 158 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 STMN2Q93045 179 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 ADAT3Q96EY9 351 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-224ENST00000557713 AKR1E2Q96JD6 320 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 RBM14Q96PK6 669 aaKnown RBP12.72□□□□□ -0.37
SCFD1-224ENST00000557713 HMG20AQ9NP66 347 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-224ENST00000557713 LEUTXA8MZ59 168 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 SIRPB1O00241 398 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 OR2F2O95006 317 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 APOL3O95236 402 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 CYB5AP00167 134 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 LPLP06858 475 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 UBCP0CG48 685 aaKnown RBP12.71□□□□□ -0.37
SCFD1-224ENST00000557713 ATF1P18846 271 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 CDK2P24941 298 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 LMO1P25800 156 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 CD34P28906 385 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 GDNFP39905 211 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 POU3F4P49335 361 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 ZNF85Q03923 595 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 PDZK1IP1Q13113 114 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 UTS2BQ765I0 119 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 OR10H4Q8NGA5 316 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 ZNF596Q8TC21 504 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 RCC1LQ96I51 464 aaKnown RBP12.71□□□□□ -0.37
SCFD1-224ENST00000557713 SLC25A33Q9BSK2 321 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 GABARAPL1Q9H0R8 117 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 GAL3ST2Q9H3Q3 398 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 TAS2R3Q9NYW6 316 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 GLS2Q9UI32 602 aa12.71□□□□□ -0.37
SCFD1-224ENST00000557713 DNAH9Q9NYC9 4486 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 NBEAL2Q6ZNJ1 2754 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 COL7A1Q02388 2944 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 IGKV1-12A0A0C4DH73 117 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 LY6LH3BQJ8 138 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 SH2D1BO14796 132 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 OR2H2O95918 312 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 IGKV1D-12P01611 117 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 PF4P02776 101 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 PRKACBP22694 351 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 POLR2IP36954 125 aaKnown RBP12.7□□□□□ -0.38
SCFD1-224ENST00000557713 GLIPR1P48060 266 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 SNU13P55769 128 aaKnown RBP12.7□□□□□ -0.38
SCFD1-224ENST00000557713 SLC35A2P78381 396 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 AESQ08117 197 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 TMED1Q13445 227 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 EME1Q96AY2 570 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 FGGYQ96C11 551 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 EXOSC4Q9NPD3 245 aaKnown RBP12.7□□□□□ -0.38
SCFD1-224ENST00000557713 ENOPH1Q9UHY7 261 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
SCFD1-224ENST00000557713 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 SH2D7A6NKC9 451 aaPredicted RBP12.69□□□□□ -0.38
SCFD1-224ENST00000557713 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
SCFD1-224ENST00000557713 TP53I3Q53FA7 332 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 TPTE2P1Q5T6R2 138 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 TMEM244Q5VVB8 128 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 LHFPL2Q6ZUX7 228 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 ZDHHC13Q8IUH4 622 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 OR2G2Q8NGZ5 317 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 MBOAT4Q96T53 435 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 CIB1Q99828 191 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 COMMD4Q9H0A8 199 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 FRRS1LQ9P0K9 344 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 GNG8Q9UK08 70 aa12.69□□□□□ -0.38
SCFD1-224ENST00000557713 A0A087X0M5 115 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 A0A1B0GX30 115 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 FAM172BPA6NC97 362 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 KDM4BO94953 1096 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 ISG15P05161 165 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 ATP6V1E1P36543 226 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 CEACAM3P40198 252 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 EGFEM1PQ0D2K5 195 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 KPNB1Q14974 876 aaKnown RBP12.68□□□□□ -0.38
SCFD1-224ENST00000557713 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 DEFB121Q5J5C9 76 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 UTF1Q5T230 341 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 Q6P435 159 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 LINC00482Q8N8I6 264 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 OR8J1Q8NGP2 316 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 BCAS4Q8TDM0 211 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 CREB3L1Q96BA8 519 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 SPSB1Q96BD6 273 aa12.68□□□□□ -0.38
SCFD1-224ENST00000557713 ODAMA1E959 279 aa12.67□□□□□ -0.38
SCFD1-224ENST00000557713 TOR1AO14656 332 aa12.67□□□□□ -0.38
SCFD1-224ENST00000557713 MT-ND2P03891 347 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms