RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TRBV5-5A0A0J9YX44 114 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 hADV38S2A0JD32 116 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 BTBD17A6NE02 478 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 MGST3O14880 152 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 DEGS1O15121 323 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 KDM4BO94953 1096 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 HTR3BO95264 441 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 PAHP00439 452 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 LALBAP00709 142 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 TFF1P04155 84 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 SELLP14151 372 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 AMY2BP19961 511 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 CRHBPP24387 322 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 PSMA1P25786 263 aaKnown RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 NPBWR2P48146 333 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 CEBPDP49716 269 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 ACTG1P63261 375 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 SLC35A2P78381 396 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 GPR50Q13585 617 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 EDDM3AQ14507 147 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF146Q15072 292 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 GRK1Q15835 563 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 XP32Q5T750 250 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 LAIR2Q6ISS4 152 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 C1orf122Q6ZSJ8 110 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 PRSS48Q7RTY5 328 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 VMO1Q7Z5L0 202 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 TRAPPC6BQ86SZ2 158 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 NKAIN3Q8N8D7 197 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 CHST4Q8NCG5 386 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 LY6G5BQ8NDX9 201 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 PXT1Q8NFP0 134 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 OR4M1Q8NGD0 313 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 ZFAND2BQ8WV99 257 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 DACT3Q96B18 629 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 NR1H4Q96RI1 486 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 TMED9Q9BVK6 235 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 YTHDF1Q9BYJ9 559 aaKnown RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 DUSP21Q9H596 190 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 HEXA-AS1Q9H8Q6 139 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 ZMAT3Q9HA38 289 aaKnown RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 SEBOXQ9HB31 216 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 ISYNA1Q9NPH2 558 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 SIRT7Q9NRC8 400 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 FOXJ3Q9UPW0 622 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 SIRT4Q9Y6E7 314 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
PSEN1-223ENST00000557511 TRGV10A0A0A0MS01 117 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 IGHV1-69DA0A0B4J2H0 117 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 A0A1W2PPK0 400 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 H3BUI4 141 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 K7N7A8 449 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 SIRPB1O00241 398 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 GABRPO00591 440 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 MRPS14O60783 128 aaKnown RBP6.86□□□□□ -1.31
PSEN1-223ENST00000557511 GPX5O75715 221 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 FSHBP01225 129 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 IGHV1-69P01742 117 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 MAS1P04201 325 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 SFTPBP07988 381 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 IGHV4-38-2P0DP08 117 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 CALCBP10092 127 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 DUSP1P28562 367 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 ADMP35318 185 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 PTGFRP43088 359 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 LGALS4P56470 323 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 HILS1P60008 231 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 ERVFRD-1P60508 538 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 GABARAPL2P60520 117 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 MEF2CQ06413 473 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-223ENST00000557511 ACSM3Q53FZ2 586 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 HSD17B12Q53GQ0 312 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-223ENST00000557511 GLT8D1Q68CQ7 371 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 BRD3OSQ6XYD6 125 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 C9orf139Q6ZV77 190 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 CEACAM19Q7Z692 300 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 CDH26Q8IXH8 852 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 PDZD9Q8IXQ8 264 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 OR8H2Q8N162 312 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 SIGLECL1Q8N7X8 197 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF485Q8NCK3 441 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 OR52N4Q8NGI2 321 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 OR51A2Q8NGJ7 313 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 OR13C5Q8NGS8 318 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 RGP1Q92546 391 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-223ENST00000557511 FOXRED1Q96CU9 486 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-223ENST00000557511 PGLYRP3Q96LB9 341 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 TBX15Q96SF7 602 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 SIRPDQ9H106 197 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 NOX4Q9NPH5 578 aa6.86□□□□□ -1.31
PSEN1-223ENST00000557511 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 F8VVB4 439 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 F8VWA3 439 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 DENRO43583 198 aaKnown RBP6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ARL6IP5O75915 188 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 OR2H2O95918 312 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 CRYBA1P05813 215 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms