RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TENM1Q9UKZ4 2725 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 A0A096LPI6 279 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 IGHV2OR16-5A0A0B4J2B6 119 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 A0A1W2PQL4 384 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 NKX6-3A6NJ46 265 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 A8MT66 165 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 C5orf58C9J3I9 102 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 M0QZ24 198 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 TIMM23O14925 209 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ORC5O43913 435 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 TUSC2O75896 110 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 IGKV3-15P01624 115 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 HMGN2P05204 90 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 OR8U8P0C7N1 319 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 GTF2F2P13984 249 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FGF7P21781 194 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SLC2A5P22732 501 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 S100A7P31151 101 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 GRK5P34947 590 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 GGT2P36268 569 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PSMB10P40306 273 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FRKP42685 505 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RBM34P42696 430 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 MAGEA12P43365 314 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 MRPL19P49406 292 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 HTR6P50406 440 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 WNT4P56705 351 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 CDC42P60953 191 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SELENOTP62341 195 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 MRPS10P82664 201 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PLA2G7Q13093 441 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PDZK1IP1Q13113 114 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RAB31Q13636 194 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 DAG1Q14118 895 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 CTF1Q16619 201 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 IMPG1Q17R60 797 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SMIM21Q3B7S5 101 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PHYHD1Q5SRE7 291 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF678Q5SXM1 525 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 DCST2Q5T1A1 773 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 AKR1C8PQ5T2L2 129 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SYT6Q5T7P8 510 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PRAMEF8Q5VWM4 474 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PRAMEF7Q5VXH5 474 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 TTC23Q5W5X9 447 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FAM219BQ5XKK7 198 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 NCR3LG1Q68D85 454 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ATRAIDQ6UW56 229 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 UQCC3Q6UW78 93 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZDHHC24Q6UX98 284 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RNF165Q6ZSG1 346 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 MRPL21Q7Z2W9 205 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FAM220AQ7Z4H9 259 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 COMMD2Q86X83 199 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF573Q86YE8 665 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 WDFY1Q8IWB7 410 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 MS4A15Q8N5U1 240 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 C15orf54Q8N8G6 183 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 CYB561A3Q8NBI2 242 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 UXS1Q8NBZ7 420 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 OR4A15Q8NGL6 344 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 OR2T4Q8NH00 348 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 OR8U1Q8NH10 309 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF563Q8TA94 476 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 THAP6Q8TBB0 222 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FBXO25Q8TCJ0 367 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RXFP4Q8TDU9 374 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 GLMPQ8WWB7 406 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SPSB1Q96BD6 273 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PPCDCQ96CD2 204 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 CMBLQ96DG6 245 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RBP7Q96R05 134 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SDF2Q99470 211 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 URM1Q9BTM9 101 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RSPO3Q9BXY4 272 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ARV1Q9H2C2 271 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF385DQ9H6B1 395 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 GAR1Q9NY12 217 aaKnown RBP4.11□□□□□ -1.75
ATXN3-247ENST00000557311 OSGIN1Q9UJX0 560 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 FBXL3Q9UKT7 428 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 CORO2BQ9UQ03 480 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 SLC22A13Q9Y226 551 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 GSTK1Q9Y2Q3 226 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 RHBDD3Q9Y3P4 386 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 TNFRSF18Q9Y5U5 241 aa4.11□□□□□ -1.75
ATXN3-247ENST00000557311 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 PPIAL4EA0A075B759 164 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 PPIAL4CA0A0B4J2A2 164 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 A0A1B0GVI7 797 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 FAM230AA0A1W2PPH8 454 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 OR6C68A6NDL8 312 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 DNAJC9-AS1A6NH13 148 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 PPIAL4DF5H284 164 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms