RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 MEGF11A6BM72 1044 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 MGST3O14880 152 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 PIN1P1O15428 100 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 PSPNO60542 156 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 IGHV1-69P01742 117 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 HSMCR30P0CW71 290 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 CPEP16870 476 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 SNU13P55769 128 aaKnown RBP8.78□□□□□ -1
LINC00239-201ENST00000556973 GABARAPL2P60520 117 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 GUCA2AQ02747 115 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 MLLT11Q13015 90 aaPredicted RBP8.78□□□□□ -1
LINC00239-201ENST00000556973 RSU1Q15404 277 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 GRK1Q15835 563 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 BRD3OSQ6XYD6 125 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 CHST4Q8NCG5 386 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 OR51T1Q8NGJ9 327 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 ZFAND2BQ8WV99 257 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 MGLLQ99685 303 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 TMED9Q9BVK6 235 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 FAM192AQ9GZU8 254 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 METTL8Q9H825 291 aaKnown RBP8.78□□□□□ -1
LINC00239-201ENST00000556973 UNKLQ9H9P5 680 aaKnown RBP8.78□□□□□ -1
LINC00239-201ENST00000556973 NOX4Q9NPH5 578 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 IL36GQ9NZH8 169 aa8.78□□□□□ -1
LINC00239-201ENST00000556973 RNF212BA8MTL3 300 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 TRIM77I1YAP6 450 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 DEGS1O15121 323 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF780AO75290 641 aaPredicted RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 RGS9O75916 674 aaPredicted RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 HTR3BO95264 441 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 OR2H2O95918 312 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 CSTBP04080 98 aaKnown RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 MAS1P04201 325 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF44P15621 663 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 GABRR1P24046 479 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 PRTN3P24158 256 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 ERP29P30040 261 aaKnown RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 OR3A4PP47883 348 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 EDDM3BP56851 147 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 SRSF2Q01130 221 aaKnown RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 SCN1BQ07699 218 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 GPR176Q14439 515 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 TBCEQ15813 527 aaPredicted RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 LIPKQ5VXJ0 399 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 Q6P435 159 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 CEACAM19Q7Z692 300 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 SIGLECL1Q8N7X8 197 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 OR4S1Q8NGB4 309 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 PHYHIPQ92561 330 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 NR1H4Q96RI1 486 aaPredicted RBP8.77□□□□□ -1.01
LINC00239-201ENST00000556973 PRDM13Q9H4Q3 707 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 TCF7L1Q9HCS4 588 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 ACOT13Q9NPJ3 140 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 LRRC42Q9Y546 428 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 DSCAML1Q8TD84 2053 aa8.77□□□□□ -1.01
LINC00239-201ENST00000556973 MXRA5Q9NR99 2828 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 hADV38S2A0JD32 116 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 FUOMA2VDF0 154 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 RNASEK-C17orf49H0YIS7 233 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SIRPB1O00241 398 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SC5DO75845 299 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 CDRT1O95170 752 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SRMP19623 302 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 PSMA1P25786 263 aaKnown RBP8.76□□□□□ -1.01
LINC00239-201ENST00000556973 MAP2K4P45985 399 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 UBE2E1P51965 193 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 EMX1Q04741 257 aaPredicted RBP8.76□□□□□ -1.01
LINC00239-201ENST00000556973 BAMBIQ13145 260 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 IL13RA2Q14627 380 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 INSL4Q14641 139 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 RUSC1-AS1Q66K80 236 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 Q6YL49 198 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF367Q7RTV3 350 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 LYPD6Q86Y78 171 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 PHC2Q8IXK0 858 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 OSR2Q8N2R0 312 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SVOPQ8N4V2 548 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 JAGN1Q8N5M9 183 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 C11orf42Q8N5U0 333 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 NKAIN3Q8N8D7 197 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 ZDHHC22Q8N966 263 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 TNFRSF14Q92956 283 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 TMEM203Q969S6 136 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 ZDHHC16Q969W1 377 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 FOXRED1Q96CU9 486 aaPredicted RBP8.76□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF48Q96MX3 618 aaPredicted RBP8.76□□□□□ -1.01
LINC00239-201ENST00000556973 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 CHST6Q9GZX3 395 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 HEXA-AS1Q9H8Q6 139 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SIRT7Q9NRC8 400 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 ST3GAL6Q9Y274 331 aa8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SF3B6Q9Y3B4 125 aaKnown RBP8.76□□□□□ -1.01
LINC00239-201ENST00000556973 SOX21Q9Y651 276 aaPredicted RBP8.76□□□□□ -1.01
LINC00239-201ENST00000556973 NAV3Q8IVL0 2385 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 MAGEA13PA6NCF6 341 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 C17orf98A8MV24 154 aa8.75□□□□□ -1.01
LINC00239-201ENST00000556973 SLC33A1O00400 549 aaPredicted RBP8.75□□□□□ -1.01
LINC00239-201ENST00000556973 NPFFO15130 113 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms