RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 KDM4BO94953 1096 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 LALBAP00709 142 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 ZNF44P15621 663 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 BDKRB2P30411 391 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 ALDH3B2P48448 385 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
SLIRP-207ENST00000556831 BDH1Q02338 343 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 MED22Q15528 200 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 GRK1Q15835 563 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 LAIR2Q6ISS4 152 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 NANOGP1Q8N7R0 232 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-207ENST00000556831 OR13C5Q8NGS8 318 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 FAM216AQ8WUB2 273 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 GCDHQ92947 438 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-207ENST00000556831 NOX4Q9NPH5 578 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 PCDHB16Q9NRJ7 776 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 C19orf12Q9NSK7 152 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 FKBP14Q9NWM8 211 aa11.59□□□□□ -0.55
SLIRP-207ENST00000556831 PAK1IP1Q9NWT1 392 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-207ENST00000556831 hADV38S2A0JD32 116 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 BTBD17A6NE02 478 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 SIRPB1O00241 398 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 RGS10O43665 173 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 CSTBP04080 98 aaKnown RBP11.58□□□□□ -0.56
SLIRP-207ENST00000556831 FBP1P09467 338 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 CALCBP10092 127 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 PRTN3P24158 256 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 DUSP1P28562 367 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF93P35789 620 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-207ENST00000556831 MTNR1BP49286 362 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 SCN1BQ07699 218 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF146Q15072 292 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 DEFB112Q30KQ8 113 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 METAP1DQ6UB28 335 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-207ENST00000556831 TRAPPC6BQ86SZ2 158 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 CROCCP3Q8IVE0 287 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 CHST4Q8NCG5 386 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 OR51A2Q8NGJ7 313 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 DUX5Q96PT3 197 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 OR14A2Q96R54 314 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 CDCA4Q9BXL8 241 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 CHST6Q9GZX3 395 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 RBM38Q9H0Z9 239 aaKnown RBP11.58□□□□□ -0.56
SLIRP-207ENST00000556831 ESM1Q9NQ30 184 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 IL36RNQ9UBH0 155 aa11.58□□□□□ -0.56
SLIRP-207ENST00000556831 SF3B6Q9Y3B4 125 aaKnown RBP11.58□□□□□ -0.56
SLIRP-207ENST00000556831 SIRT4Q9Y6E7 314 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-207ENST00000556831 TRBV5-5A0A0J9YX44 114 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 GABRPO00591 440 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 ALDOBP05062 364 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 SPHARQ15513 63 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 RBM48Q5RL73 367 aaKnown RBP11.57□□□□□ -0.56
SLIRP-207ENST00000556831 RNLSQ5VYX0 342 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 JAGN1Q8N5M9 183 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 PXT1Q8NFP0 134 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 OR52N4Q8NGI2 321 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 UFD1Q92890 307 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 PGLYRP3Q96LB9 341 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF48Q96MX3 618 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-207ENST00000556831 METTL9Q9H1A3 318 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 HEXA-AS1Q9H8Q6 139 aa11.57□□□□□ -0.56
SLIRP-207ENST00000556831 SEBOXQ9HB31 216 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-207ENST00000556831 IGKV1-12A0A0C4DH73 117 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 MDFIC2A0A1B0GVS7 189 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 A0A1W2PRD5 423 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 A0A1W2PRF3 423 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 A0A1W2PRM7 423 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 MEIOCA2RUB1 952 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 MGST3O14880 152 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 DEGS1O15121 323 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 NPFFO15130 113 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 HOXA3O43365 443 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF780AO75290 641 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF737O75373 536 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 OR2H2O95918 312 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 IGKV1D-12P01611 117 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 CRYBA1P05813 215 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 CD1AP06126 327 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 HSMCR30P0CW71 290 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 FSTP19883 344 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 UBE2E1P51965 193 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 LGALS4P56470 323 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 ZP1P60852 638 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-207ENST00000556831 MEF2CQ06413 473 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-207ENST00000556831 KLRD1Q13241 179 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 TMEM200BQ69YZ2 307 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF529Q6P280 563 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 Q8N7P7 452 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF485Q8NCK3 441 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 SSMEM1Q8WWF3 244 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 ZNF714Q96N38 554 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 TMED9Q9BVK6 235 aa11.56□□□□□ -0.56
SLIRP-207ENST00000556831 UNKLQ9H9P5 680 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms