RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PIPP12273 146 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-222ENST00000556768 GABRR1P24046 479 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 POU3F4P49335 361 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 ERVK11-1P61568 191 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 COL10A1Q03692 680 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 MED21Q13503 144 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 KIR3DS1Q14943 382 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 SPIN3Q5JUX0 258 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 PRR31Q5SQ13 230 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 LHFPL3Q86UP9 236 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 SERPINA12Q8IW75 414 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 BATF2Q8N1L9 274 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 SYS1Q8N2H4 156 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 BEND2Q8NDZ0 799 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 RHOXF1Q8NHV9 184 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 TNFRSF14Q92956 283 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 SLAMF9Q96A28 289 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 SNX22Q96L94 193 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 RDH12Q96NR8 316 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 OPALINQ96PE5 141 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 SSX3Q99909 188 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 ALG8Q9BVK2 526 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 ELL3Q9HB65 397 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-222ENST00000556768 RHOFQ9HBH0 211 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 HES4Q9HCC6 221 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 C19orf12Q9NSK7 152 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 CHCHD3Q9NX63 227 aaKnown RBP5.99□□□□□ -1.45
SCFD1-222ENST00000556768 MTCH1Q9NZJ7 389 aa5.99□□□□□ -1.45
SCFD1-222ENST00000556768 EXOGQ9Y2C4 368 aaKnown RBP5.99□□□□□ -1.45
SCFD1-222ENST00000556768 IRGMA1A4Y4 181 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 TMEM212A6NML5 194 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 J3KRW8 73 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 J3QRE1 110 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 M0QZ24 198 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 CD2P06729 351 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 CCDC159P0C7I6 412 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ZNF728P0DKX0 622 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 DBTP11182 482 aaKnown RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ATF1P18846 271 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 AZGP1P25311 298 aaKnown RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 CEBPDP49716 269 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ISL1P61371 349 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 PRB3Q04118 309 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ZNF91Q05481 1191 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 MEF2CQ06413 473 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 PDZK1IP1Q13113 114 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 KLRD1Q13241 179 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ALKBH1Q13686 389 aaKnown RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 GRK1Q15835 563 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 AANATQ16613 207 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ZSCAN26Q16670 478 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 TMPRSS11AQ6ZMR5 421 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 OR8H2Q8N162 312 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 FAM58AQ8N1B3 248 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 OR5AK2Q8NH90 309 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 LGALS12Q96DT0 336 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ADAT3Q96EY9 351 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ZNF714Q96N38 554 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 AMBNQ9NP70 447 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 C8orf4Q9NR00 106 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 ABCB10Q9NRK6 738 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 FAM118AQ9NWS6 357 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 DHDHQ9UQ10 334 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
SCFD1-222ENST00000556768 TRBV2A0A0J9YWF9 115 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 NOTOA8MTQ0 251 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 HAND1O96004 215 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 RBP4P02753 201 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 HCKP08631 526 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 PRKACAP17612 351 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 MYL12AP19105 171 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 COX7A1P24310 79 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 DCKP27707 260 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 KIR3DL2P43630 455 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 ARHGDIBP52566 201 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 DLX1P56177 255 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 DYNC1I2Q13409 638 aaKnown RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 EDDM3AQ14507 147 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TAF9Q16594 264 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 LRRC75BQ2VPJ9 315 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TTC23Q5W5X9 447 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TREML4Q6UXN2 200 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TRAPPC6BQ86SZ2 158 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 PNKDQ8N490 385 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 LINC01006Q8NI28 216 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TSEN15Q8WW01 171 aaKnown RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TAF15Q92804 592 aaKnown RBP eCLIP5.97□□□□□ -1.456e-10■■■□□ 17.7
SCFD1-222ENST00000556768 PELI1Q96FA3 418 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 MBOAT4Q96T53 435 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 MEGF9Q9H1U4 602 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 PPA2Q9H2U2 334 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 ZCCHC4Q9H5U6 513 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 SEBOXQ9HB31 216 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 SMPD3Q9NY59 655 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-222ENST00000556768 PITPNC1Q9UKF7 332 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 DOCK11Q5JSL3 2073 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 IGKV1-27A0A075B6S5 117 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 TRGV10A0A0A0MS01 117 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 H3BUX3 64 aa5.97□□□□□ -1.45
SCFD1-222ENST00000556768 MGST3O14880 152 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms