RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 A0A0X1KG70 313 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 A0A1B0GTI1 187 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 VGLL3A8MV65 326 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 F8VZ95 297 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ITGB1BP1O14713 200 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 CRXO43186 299 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 MPZL2O60487 215 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ADAP1O75689 374 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 MYO1DO94832 1006 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 CYB5R3P00387 301 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 TPM3P06753 285 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 OR4Q2P0C623 313 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 LIMS3P0CW19 117 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 LIMS4P0CW20 117 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 TGFBR1P36897 503 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 TTPAP49638 278 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ACOT2P49753 483 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 PLTPP55058 493 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 TAS2R43P59537 309 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 TPM4P67936 248 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 DMC1Q14565 340 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ZNHIT3Q15649 155 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 SP6Q3SY56 376 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 Q499Y3 187 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 RBM48Q5RL73 367 aaKnown RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 KCTD16Q68DU8 428 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 MORN3Q6PF18 240 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 UGT2A3Q6UWM9 527 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 SSX7Q7RTT5 188 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ORMDL3Q8N138 153 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 TMEM105Q8N8V8 129 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 FAM57AQ8TBR7 257 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ORAOV1Q8WV07 137 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 NELFBQ8WX92 580 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 C22orf15Q8WYQ4 148 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 CCDC127Q96BQ5 260 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 MRPL20Q9BYC9 149 aaKnown RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 LHX5Q9H2C1 402 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 DSN1Q9H410 356 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 WDR54Q9H977 334 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 IMP3Q9NV31 184 aaKnown RBP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 RBM22Q9NW64 420 aaKnown RBP eCLIP2.13□□□□□ -2.07
SCFD1-221ENST00000556534 C1orf109Q9NX04 203 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 ENOPH1Q9UHY7 261 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 CBY1Q9Y3M2 126 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 INSIG2Q9Y5U4 225 aa2.13□□□□□ -2.07
SCFD1-221ENST00000556534 COL5A1P20908 1838 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 MYO15BQ96JP2 1530 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 NISCHQ9Y2I1 1504 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 IGHV1-3A0A0C4DH29 117 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 LOC389332A0A1B0GUA5 103 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 CENPBD1B2RD01 187 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 SNAP29O95721 258 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 CDK1P06493 297 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 CD28P10747 220 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 CD40LGP29965 261 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 LGALS7P47929 136 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 SLC18A1P54219 525 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 MEF2CQ06413 473 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 TMEM249Q2WGJ8 235 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 CLEC12AQ5QGZ9 265 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 BRD3OSQ6XYD6 125 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 USP50Q70EL3 339 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 TRMT10CQ7L0Y3 403 aaKnown RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 RNF10Q8N5U6 811 aaKnown RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 SLC35G3Q8N808 338 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 ZNF555Q8NEP9 628 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 SUN5Q8TC36 379 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 FAM45AQ8TCE6 357 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 DYNC2LI1Q8TCX1 351 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 PGLYRP3Q96LB9 341 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 FAM210AQ96ND0 272 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 C7orf50Q9BRJ6 194 aaKnown RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 MARVELD1Q9BSK0 173 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 MS4A8Q9BY19 250 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 TBL1XR1Q9BZK7 514 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 METTL17Q9H7H0 456 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-221ENST00000556534 ASCL3Q9NQ33 180 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 PARP11Q9NR21 331 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 DIABLOQ9NR28 239 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 SDHAF3Q9NRP4 125 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 RAB22AQ9UL26 194 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 RAD50Q92878 1312 aa2.12□□□□□ -2.07
SCFD1-221ENST00000556534 MYBPHLA2RUH7 354 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 GOLGA8IPA6NC78 632 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 KLRC4-KLRK1H3BQV0 150 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 UBDO15205 165 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 TOX3O15405 576 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-221ENST00000556534 GYG2O15488 501 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 FABP7O15540 132 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 SCO1O75880 301 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 OR2A4O95047 310 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 MAS1P04201 325 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 SEC11BP0C7V7 166 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 PRDX1Q06830 199 aaKnown RBP2.11□□□□□ -2.07
SCFD1-221ENST00000556534 MAPRE2Q15555 327 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 FAM222AQ5U5X8 452 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 NIPAL1Q6NVV3 410 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 FAM231DQ6ZW35 169 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 PDPNQ86YL7 162 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms