RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MYF6P23409 242 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 GABRR1P24046 479 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 COMPP49747 757 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 UBE2E1P51965 193 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 SNU13P55769 128 aaKnown RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 DLX1P56177 255 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 PPP3R1P63098 170 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 PRB3Q04118 309 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF273Q14593 569 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 Q499Y3 187 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 C6orf141Q5SZD1 244 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 RNLSQ5VYX0 342 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 Q6YL49 198 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 GDPD3Q7L5L3 318 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 LDLRAD3Q86YD5 345 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 ZFP41Q8N8Y5 198 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 PXT1Q8NFP0 134 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 OR4M1Q8NGD0 313 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 OR13C5Q8NGS8 318 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 GCDHQ92947 438 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 ANKRD60Q9BZ19 345 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 LIN7BQ9HAP6 207 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 EXOSC4Q9NPD3 245 aaKnown RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 ERGIC3Q9Y282 383 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 POMT1Q9Y6A1 747 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 hCG_1809904A0A1W2PP81 198 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PPE2 198 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PR64 198 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PRV1 198 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 GABRPO00591 440 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 PSPNO60542 156 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 RBP4P02753 201 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 ALDOBP05062 364 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 CD1AP06126 327 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 FBP1P09467 338 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM225BP0DP42 221 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 HKR1P10072 659 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 CCL3L1P16619 93 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 FSTP19883 344 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 DUSP1P28562 367 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 SAA4P35542 130 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 HSPA13P48723 471 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 MTNR1BP49286 362 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 BMXP51813 675 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 EDDM3BP56851 147 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 RPS11P62280 158 aaKnown RBP eCLIP9.43□□□□□ -0.9
SLIRP-205ENST00000556310 BDH1Q02338 343 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 MEF2CQ06413 473 aaPredicted RBP9.43□□□□□ -0.9
SLIRP-205ENST00000556310 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 EDDM3AQ14507 147 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 GRK1Q15835 563 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 HCP5Q6MZN7 132 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 IZUMO2Q6UXV1 221 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 NANOGP1Q8N7R0 232 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 OR52N4Q8NGI2 321 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 PPP1R35Q8TAP8 253 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 TNFAIP8L1Q8WVP5 186 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 MYDGFQ969H8 173 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 GPER1Q99527 375 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 MND1Q9BWT6 205 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM138Q9NPI0 162 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 SCN3BQ9NY72 215 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 CKLFQ9UBR5 152 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 GSTK1Q9Y2Q3 226 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 FAM96BQ9Y3D0 163 aa9.43□□□□□ -0.9
SLIRP-205ENST00000556310 FBN3Q75N90 2809 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 PNMA8CA0A1B0GUJ8 204 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 hADV38S2A0JD32 116 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 SIRPB1O00241 398 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 SH2D1BO14796 132 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 MGST3O14880 152 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 OR2H2O95918 312 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 CALCBP10092 127 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 IGFBP3P17936 291 aaPredicted RBP9.42□□□□□ -0.9
SLIRP-205ENST00000556310 CELP19835 753 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 BDKRB2P30411 391 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 OR3A1P47881 315 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 DLX6P56179 175 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 ERVFRD-1P60508 538 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 SLC35A2P78381 396 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 RIPK1Q13546 671 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 DOC2BQ14184 412 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 DDI2Q5TDH0 399 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 ELP2Q6IA86 826 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 C16orf87Q6PH81 154 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 TCF23Q7RTU1 214 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 SATL1Q86VE3 508 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 C11orf42Q8N5U0 333 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 CHST4Q8NCG5 386 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 THRSPQ92748 146 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 OR14A2Q96R54 314 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 CDCA4Q9BXL8 241 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 FAM192AQ9GZU8 254 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 CHST6Q9GZX3 395 aa9.42□□□□□ -0.9
SLIRP-205ENST00000556310 HEXA-AS1Q9H8Q6 139 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms