RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 RAB38P57729 211 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 PRKCDQ05655 676 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 BAXQ07812 192 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 TMEM241Q24JQ0 296 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 USP50Q70EL3 339 aaPredicted RBP1.28□□□□□ -2.2
SCFD1-218ENST00000556256 GALNT10Q86SR1 603 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 CYP4Z1Q86W10 505 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 AMN1Q8IY45 258 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 ST13P4Q8IZP2 240 aaPredicted RBP1.28□□□□□ -2.2
SCFD1-218ENST00000556256 OR2M3Q8NG83 312 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 ZCCHC13Q8WW36 166 aaKnown RBP1.28□□□□□ -2.2
SCFD1-218ENST00000556256 C22orf15Q8WYQ4 148 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 RBPMSQ93062 196 aaKnown RBP1.28□□□□□ -2.2
SCFD1-218ENST00000556256 FMC1Q96HJ9 113 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 YPEL4Q96NS1 127 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 CIB1Q99828 191 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 TXNIPQ9H3M7 391 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 POMKQ9H5K3 350 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 PLEKHA1Q9HB21 404 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 ZNF586Q9NXT0 402 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 DNAJC27Q9NZQ0 273 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 ZNF780BQ9Y6R6 833 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 NRCAMQ92823 1304 aa1.28□□□□□ -2.2
SCFD1-218ENST00000556256 PLXNB3Q9ULL4 1909 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ZSWIM8A7E2V4 1837 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 MGAT4DA6NG13 374 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 D6RAR5 112 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 PSMD11O00231 422 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 CDIPTO14735 213 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 IGHV3-53P01767 116 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 TRGV3P03979 118 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 CCNOP22674 350 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 TGFBR2P37173 567 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 LGALS7P47929 136 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 TTPAP49638 278 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 XKP51811 444 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 KLF3P57682 345 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-218ENST00000556256 DSTNP60981 165 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 STX4Q12846 297 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 GPR176Q14439 515 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 PSG3Q16557 428 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF773Q6PK81 442 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 Q6ZT83 130 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 RBM45Q8IUH3 476 aaKnown RBP1.27□□□□□ -2.21
SCFD1-218ENST00000556256 DRAXINQ8NBI3 349 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-218ENST00000556256 LY6G5BQ8NDX9 201 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 OR2Y1Q8NGV0 311 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ACTL9Q8TC94 416 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 BLNKQ8WV28 456 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 MSANTD3Q96H12 275 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF396Q96N95 335 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-218ENST00000556256 BEX2Q9BXY8 128 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 DUSP21Q9H596 190 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ASF1BQ9NVP2 202 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 SLC22A14Q9Y267 594 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF443Q9Y2A4 671 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-218ENST00000556256 ICOSQ9Y6W8 199 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 THADAQ6YHU6 1953 aa1.27□□□□□ -2.21
SCFD1-218ENST00000556256 TMEM131Q92545 1883 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 SYNRGQ9UMZ2 1314 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF729A6NN14 1252 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-218ENST00000556256 A8MWP4 228 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 F5H5P2 479 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 hCG_2039718K7EN88 272 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 PLPP3O14495 311 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 SHOX2O60902 331 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-218ENST00000556256 MYO1DO94832 1006 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 CA2P00918 260 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 IGKV1D-33P01593 117 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 IGKV1-33P01594 117 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 HLA-AP01891 365 aaKnown RBP1.26□□□□□ -2.21
SCFD1-218ENST00000556256 S100A9P06702 114 aaKnown RBP1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ELK4P28324 431 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 GTF2H1P32780 548 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 RANBP1P43487 201 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 TNFRSF9Q07011 255 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 BNIP2Q12982 314 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF141Q15928 474 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ACTBL2Q562R1 376 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 UBE2NLQ5JXB2 153 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 AADACL4Q5VUY2 407 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ERICH5Q6P6B1 374 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 SMARCD3Q6STE5 483 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 Q6ZQT7 251 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 PAGE2Q7Z2X7 111 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 MARCH3Q86UD3 253 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 PDCL2Q8N4E4 241 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ZIC4Q8N9L1 334 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 CDRT4Q8N9R6 151 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 OR2AE1Q8NHA4 323 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 CLHC1Q8NHS4 586 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 PYURFQ96I23 114 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF75AQ96N20 296 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 COPS4Q9BT78 406 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 PRRG3Q9BZD7 231 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF436Q9C0F3 470 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-218ENST00000556256 ABCG5Q9H222 651 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 DSN1Q9H410 356 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 XKR8Q9H6D3 395 aa1.26□□□□□ -2.21
SCFD1-218ENST00000556256 MAT2BQ9NZL9 334 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms