RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A12PA8MX19 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A5PA8MXJ8 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PF4P02776 101 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A15PP0C7V4 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A13PP0C7W8 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A14PP0C7W9 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A24PP0C7X0 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CGB3P0DN86 165 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CGB7P0DN87 165 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 HOXB6P17509 224 aaKnown RBP11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CDK2P24941 298 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 LMO1P25800 156 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 POLR2IP36954 125 aaKnown RBP11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ACTR3P61158 418 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 C17orf58Q2M2W7 97 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 HLA-DRB5Q30154 266 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SPATA24Q86W54 205 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SLC7A6OSQ96CW6 309 aaPredicted RBP11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 BORCS8Q96FH0 119 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 COQ2Q96H96 371 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 TEX12Q9BXU0 123 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 POMPQ9Y244 141 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 HUWE1Q7Z6Z7 4374 aaKnown RBP11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 A0A087X0M5 115 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 LOC107986453A0A1B0GWG9 222 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 A0A1B0GX30 115 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 BUB1B-PAK6H3BSN5 160 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SIRPB1O00241 398 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GATBO75879 557 aaKnown RBP11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR2H2O95918 312 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 KRT8P05787 483 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PRKACAP17612 351 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SNU13P55769 128 aaKnown RBP11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ZNF85Q03923 595 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 AESQ08117 197 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PDZK1IP1Q13113 114 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 IL18R1Q13478 541 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FLOT2Q14254 428 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 DEFB121Q5J5C9 76 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SPIN3Q5JUX0 258 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 Q6P435 159 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ZBTB49Q6ZSB9 765 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 Q8IYB0 196 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OSR2Q8N2R0 312 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR10AC1Q8NH08 325 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 B9D2Q9BPU9 175 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 TAS2R3Q9NYW6 316 aa11.37□□□□□ -0.59
CHMP4BP1-201ENST00000556017 LEUTXA8MZ59 168 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SULT1C4O75897 302 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 DUS4LO95620 317 aaKnown RBP11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR2T7P0C7T2 308 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 BRS3P32247 399 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 POU3F4P49335 361 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 THBS3P49746 956 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 RBP2P50120 134 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 NANOS3P60323 173 aaKnown RBP11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 UTS2BQ765I0 119 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GID4Q8IVV7 300 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ENTHD1Q8IYW4 607 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR4X2Q8NGF9 303 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PP6455Q8WZ26 134 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 C10orf35Q96D05 121 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 COMMD4Q9H0A8 199 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 KRT84Q9NSB2 600 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 WARS2Q9UGM6 360 aaKnown RBP11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ODAMA1E959 279 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 KDM4BO94953 1096 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM107AO95990 144 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CSN2P05814 226 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ATF1P18846 271 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 HTR1FP30939 366 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ATP1B3P54709 279 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CDC42P60953 191 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 DIAPH2-AS1Q14236 149 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CDK5R1Q15078 307 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 TRAPPC6BQ86SZ2 158 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CCDC197Q8NCU1 140 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 CCDC54Q8NEL0 328 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR51A4Q8NGJ6 313 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 OR2G2Q8NGZ5 317 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 ZNF596Q8TC21 504 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 RFT1Q96AA3 541 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 AKR1E2Q96JD6 320 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SPACA5Q96QH8 159 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 MBOAT4Q96T53 435 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 P2RX4Q99571 388 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 PPIL3Q9H2H8 161 aaKnown RBP11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FRRS1LQ9P0K9 344 aa11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 H2AFY2Q9P0M6 372 aaPredicted RBP11.35□□□□□ -0.59
CHMP4BP1-201ENST00000556017 A0A1W2PPI3 338 aa11.34□□□□□ -0.59
CHMP4BP1-201ENST00000556017 J3QRE1 110 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms