RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 GPR35Q9HC97 309 aa6.06□□□□□ -1.44
TDP1-213ENST00000555880 STRAPQ9Y3F4 350 aaKnown RBP6.06□□□□□ -1.44
TDP1-213ENST00000555880 KLF2Q9Y5W3 355 aaPredicted RBP6.06□□□□□ -1.44
TDP1-213ENST00000555880 A0A0G2JMM0 328 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 A0A1W2PPB8 328 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 A0A1W2PRS3 328 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM221AA4D161 298 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 KIR3DP1A8MWS1 328 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 NTN3O00634 580 aaPredicted RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 DANCRP0C864 163 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 PATE4P0C8F1 98 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 NFYBP25208 207 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 GDF1P27539 372 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 PPT1P50897 306 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 RAB5BP61020 215 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZNF92Q03936 586 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZFP36L1Q07352 338 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 KRTAP27-1Q3LI81 207 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 MIDNQ504T8 468 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 C4orf17Q53FE4 359 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 OXLD1Q5BKU9 147 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZNF468Q5VIY5 522 aaPredicted RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 MEX3BQ6ZN04 569 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 DPPA2Q7Z7J5 298 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZNF611Q8N823 705 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZNF565Q8N9K5 539 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 RXFP4Q8TDU9 374 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 DYRK2Q92630 601 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ERGIC1Q969X5 290 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 AKR1E2Q96JD6 320 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 C18orf12Q96KH6 178 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 SPIN2AQ99865 258 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 SPIN2BQ9BPZ2 258 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 GINS3Q9BRX5 216 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 RSRP1Q9BUV0 290 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 PBDC1Q9BVG4 233 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 EIF5A2Q9GZV4 153 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 ARV1Q9H2C2 271 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 LIME1Q9H400 295 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ATPIF1Q9UII2 106 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 MYO15AQ9UKN7 3530 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 IGKV1-12A0A0C4DH73 117 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 C3orf85A0A1B0GTC6 90 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A10PA6NDY2 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A18PA6NE21 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A16PA6NEW6 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A20PA6NIJ5 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A8PA6NJQ4 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A7PA6NKC0 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A22PA8MWA6 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A12PA8MX19 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A5PA8MXJ8 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A23PA8MXZ1 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 LINC01387J3KSC0 135 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 MSTNO14793 375 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 NME2P1O60361 137 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZNF205O95201 554 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 CDS2O95674 445 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 PPYP01298 95 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 IGKV1D-12P01611 117 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 TK1P04183 234 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 GLAP06280 429 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A15PP0C7V4 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A13PP0C7W8 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A14PP0C7W9 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 FAM90A24PP0C7X0 464 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 TDGF1P13385 188 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 AADACP22760 399 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 PAX6P26367 422 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 RPL35P42766 123 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 CYB561P49447 251 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 AKIRIN2Q53H80 203 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 TRIM61Q5EBN2 209 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 WIPI1Q5MNZ9 446 aaPredicted RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 ACER2Q5QJU3 275 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 DCAF12Q5T6F0 453 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 SLC25A26Q70HW3 274 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 C15orf54Q8N8G6 183 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 LFNGQ8NES3 379 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 LYPD6BQ8NI32 183 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 MARS2Q96GW9 593 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 PAPOLGQ9BWT3 736 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 PRDM14Q9GZV8 571 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 PARP12Q9H0J9 701 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 C19orf12Q9NSK7 152 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 ZNF581Q9P0T4 197 aa6.05□□□□□ -1.44
TDP1-213ENST00000555880 BOKQ9UMX3 212 aaPredicted RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 UBE2J1Q9Y385 318 aaPredicted RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 MRPS18CQ9Y3D5 142 aaKnown RBP6.05□□□□□ -1.44
TDP1-213ENST00000555880 NCKAP5O14513 1909 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 LRRC3CA6NJW4 275 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 PCP4L1A6NKN8 68 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 B4E171 279 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 PRSS44E7EML9 344 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 M0R036 132 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 MPPED1O15442 326 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms