RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 IGFBP3P17936 291 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-219ENST00000555563 CELP19835 753 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 FSTP19883 344 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 EEF1B2P24534 225 aaKnown RBP11.22□□□□□ -0.61
SHMT2-219ENST00000555563 SAA4P35542 130 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 OR3A1P47881 315 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 OR3A4PP47883 348 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 HSPA13P48723 471 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 SLC35A2P78381 396 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 RIPK1Q13546 671 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 RNLSQ5VYX0 342 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 Q6YL49 198 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 TPRX1Q8N7U7 411 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 PXT1Q8NFP0 134 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 OR4S1Q8NGB4 309 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 TBC1D15Q8TC07 691 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 MND1Q9BWT6 205 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 CDCA4Q9BXL8 241 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 RHOFQ9HBH0 211 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 TMEM138Q9NPI0 162 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 GLS2Q9UI32 602 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 PCDHGB5Q9Y5G0 923 aa11.22□□□□□ -0.61
SHMT2-219ENST00000555563 TRBV5-7A0A0A0MS05 114 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 SH2D1BO14796 132 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 ALDOBP05062 364 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 CD1AP06126 327 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 BDKRB2P30411 391 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 MTNR1BP49286 362 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 UBE2E1P51965 193 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 DLX6P56179 175 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 ERVFRD-1P60508 538 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 BDH1Q02338 343 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 IRF3Q14653 427 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 LDLRAD3Q86YD5 345 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-219ENST00000555563 DERL3Q96Q80 235 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 OR5M11Q96RB7 305 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 TNFRSF19Q9NS68 423 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 CKLFQ9UBR5 152 aa11.21□□□□□ -0.61
SHMT2-219ENST00000555563 LSM2Q9Y333 95 aaKnown RBP11.21□□□□□ -0.61
SHMT2-219ENST00000555563 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.62
SHMT2-219ENST00000555563 NBEAL1Q6ZS30 2694 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 A0A1W2PPK0 400 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 MGST3O14880 152 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ZNF728P0DKX0 622 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ZNF44P15621 663 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 COX7A1P24310 79 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ZNF93P35789 620 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-219ENST00000555563 P2RX3P56373 397 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 SCN1BQ07699 218 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ACSM1Q08AH1 577 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ELP2Q6IA86 826 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 Q6P435 159 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ZNF782Q6ZMW2 699 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-219ENST00000555563 OR10K1Q8NGX5 313 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 PPP1R35Q8TAP8 253 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 SSMEM1Q8WWF3 244 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 ZNF184Q99676 751 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-219ENST00000555563 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 PPA2Q9H2U2 334 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 DUSP21Q9H596 190 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 TPRKBQ9Y3C4 175 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 FAM96BQ9Y3D0 163 aa11.2□□□□□ -0.62
SHMT2-219ENST00000555563 hCG_1809904A0A1W2PP81 198 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 A0A1W2PPE2 198 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 A0A1W2PR64 198 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 A0A1W2PRV1 198 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 hADV38S2A0JD32 116 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 MEIOCA2RUB1 952 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 C17orf98A8MV24 154 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-219ENST00000555563 GPX5O75715 221 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 CDRT1O95170 752 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 IGHV4-59P01825 116 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 FBP1P09467 338 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 HKR1P10072 659 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 CRHBPP24387 322 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 LMO1P25800 156 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 PTGFRP43088 359 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-219ENST00000555563 BMXP51813 675 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-219ENST00000555563 RSU1Q15404 277 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 SPHARQ15513 63 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 MED22Q15528 200 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 PIGYQ3MUY2 71 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 C16orf87Q6PH81 154 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 ASCL4Q6XD76 172 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 CHST4Q8NCG5 386 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 C17orf50Q8WW18 174 aa11.19□□□□□ -0.62
SHMT2-219ENST00000555563 TAF15Q92804 592 aaKnown RBP eCLIP11.19□□□□□ -0.62
SHMT2-219ENST00000555563 ZNF714Q96N38 554 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms