RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RAB32Q13637 225 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 DEFB109BQ30KR1 87 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 HAGHLQ6PII5 290 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-207ENST00000555497 MED9Q9NWA0 146 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A10PA6NDY2 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A18PA6NE21 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A16PA6NEW6 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A20PA6NIJ5 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A8PA6NJQ4 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A7PA6NKC0 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A22PA8MWA6 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A12PA8MX19 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A5PA8MXJ8 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A23PA8MXZ1 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A15PP0C7V4 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A13PP0C7W8 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A14PP0C7W9 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 FAM90A24PP0C7X0 464 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 RBMXP38159 391 aaKnown RBP20.78■□□□□ 0.92
TMEM260-207ENST00000555497 HIST1H2AAQ96QV6 131 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 GSKIPQ9P0R6 139 aa20.78■□□□□ 0.92
TMEM260-207ENST00000555497 MSGN1A6NI15 193 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 ANKRD30BLA7E2S9 258 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 TRAPPC2LH3BP13 241 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 LYZL6O75951 148 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 LYL1P12980 280 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 IGSF11Q5DX21 431 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 MKXQ8IYA7 352 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-207ENST00000555497 C1orf123Q9NWV4 160 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 RASL12Q9NYN1 266 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 ZNF292O60281 2723 aa20.77■□□□□ 0.92
TMEM260-207ENST00000555497 CA6P23280 308 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 TSC22D1Q15714 1073 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 SP6Q3SY56 376 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 PXDC1Q5TGL8 231 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 PRSS54Q6PEW0 395 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 UNQ6126/PRO20091Q6UXV3 157 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 PDZD9Q8IXQ8 264 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 RCC2Q9P258 522 aaKnown RBP20.77■□□□□ 0.91
TMEM260-207ENST00000555497 KCNMB2Q9Y691 235 aa20.77■□□□□ 0.91
TMEM260-207ENST00000555497 F5H0A9 414 aaPredicted RBP20.76■□□□□ 0.91
TMEM260-207ENST00000555497 GUSBP1Q15486 140 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 IGF2-ASQ6U949 168 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 ARPC5LQ9BPX5 153 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 TRAV17A0A0B4J275 112 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 HSPB6O14558 160 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 AADACP22760 399 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 PHLDA2Q53GA4 152 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 GALNT11Q8NCW6 608 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 OR5L1Q8NGL2 311 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 MRPL24Q96A35 216 aaKnown RBP20.76■□□□□ 0.91
TMEM260-207ENST00000555497 MOB3AQ96BX8 217 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 MPC1Q9Y5U8 109 aa20.76■□□□□ 0.91
TMEM260-207ENST00000555497 BET1O15155 118 aa20.75■□□□□ 0.91
TMEM260-207ENST00000555497 TBC1D28Q2M2D7 210 aa20.75■□□□□ 0.91
TMEM260-207ENST00000555497 PLEKHN1Q494U1 663 aaPredicted RBP20.75■□□□□ 0.91
TMEM260-207ENST00000555497 FAM214BQ7L5A3 538 aa20.75■□□□□ 0.91
TMEM260-207ENST00000555497 OR11L1Q8NGX0 322 aa20.75■□□□□ 0.91
TMEM260-207ENST00000555497 GLRX2Q9NS18 164 aa20.75■□□□□ 0.91
TMEM260-207ENST00000555497 SPENQ96T58 3664 aaKnown RBP20.75■□□□□ 0.91
TMEM260-207ENST00000555497 NAPSAO96009 420 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 PRKACAP17612 351 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 IDH3GP51553 393 aaPredicted RBP20.74■□□□□ 0.91
TMEM260-207ENST00000555497 ERVS71-1P61550 626 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 RTN4IP1Q8WWV3 396 aaPredicted RBP20.74■□□□□ 0.91
TMEM260-207ENST00000555497 PIK3IP1Q96FE7 263 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 SLC25A32Q9H2D1 315 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 NAA60Q9H7X0 242 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 COQ3Q9NZJ6 369 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 LHX6Q9UPM6 363 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 PRR14LQ5THK1 2151 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 RHBDL1O75783 438 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 OR5AC1P0C628 307 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 NUBP1P53384 320 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 GNG3P63215 75 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 TMEM187Q14656 261 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 GGNBP1Q5YKI7 109 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 C17orf78Q8N4C9 275 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 C9orf106Q8NAJ2 232 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 Q9N2K0 584 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 SLC2A9Q9NRM0 540 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 CYTL1Q9NRR1 136 aa20.74■□□□□ 0.91
TMEM260-207ENST00000555497 AQP7O14520 342 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 GLI4P10075 376 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 IAH1Q2TAA2 248 aaPredicted RBP20.73■□□□□ 0.91
TMEM260-207ENST00000555497 ABCA11PQ4W5N1 156 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 OR5B21A6NL26 309 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 SMPD2O60906 423 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 KIR2DL2P43627 348 aaPredicted RBP20.73■□□□□ 0.91
TMEM260-207ENST00000555497 GABRA6Q16445 453 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 MPV17LQ2QL34 196 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 CNEP1R1Q8N9A8 125 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 PRSS33Q8NF86 280 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 OR51I2Q9H344 312 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 PFDN2Q9UHV9 154 aa20.73■□□□□ 0.91
TMEM260-207ENST00000555497 SCTP09683 121 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 S100A10P60903 97 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 UBE2NP61088 152 aaKnown RBP20.72■□□□□ 0.91
TMEM260-207ENST00000555497 VWA1Q6PCB0 445 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms