RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 DUX4L2P0CJ85 424 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4L3P0CJ86 424 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4L4P0CJ87 422 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4L5P0CJ88 424 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4L6P0CJ89 424 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4L7P0CJ90 424 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 IGHV4-31P0DP07 118 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 ZFP36P26651 326 aaKnown RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUSP1P28562 367 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 SERPINB10P48595 397 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 PITPNBP48739 271 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 CEBPDP49716 269 aaPredicted RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 CLDN12P56749 244 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 RPS27AP62979 156 aaKnown RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 COL10A1Q03692 680 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 P2RY14Q15391 338 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 PIGYQ3MUY2 71 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 ESCO2Q56NI9 601 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 LRRC10Q5BKY1 277 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 C17orf107Q6ZR85 190 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 USP43Q70EL4 1123 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 FAM89BQ8N5H3 189 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 LINC01356Q8N9X3 169 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 OR5D13Q8NGL4 314 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DMRTB1Q96MA1 342 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 SSBP3Q9BWW4 388 aaPredicted RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 RBM38Q9H0Z9 239 aaKnown RBP10.53□□□□□ -0.72
SYNE2-219ENST00000555323 BANF2Q9H503 90 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 LIN7BQ9HAP6 207 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DUX4Q9UBX2 424 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 DAPK2Q9UIK4 370 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 MED13LQ71F56 2210 aa10.53□□□□□ -0.72
SYNE2-219ENST00000555323 YLPM1P49750 1951 aaKnown RBP10.52□□□□□ -0.72
SYNE2-219ENST00000555323 MALRD1Q5VYJ5 2156 aa10.52□□□□□ -0.72
SYNE2-219ENST00000555323 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 SMIM30A4D0T7 59 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 H3BUI4 141 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 SLC33A1O00400 549 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 PSPNO60542 156 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 CRTAPO75718 401 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 ECDO95905 644 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 TFF1P04155 84 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 TK1P04183 234 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 CSN2P05814 226 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 SELLP14151 372 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 RAB6AP20340 208 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 GNB2P62879 340 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 PAX2Q02962 417 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 TAF9Q16594 264 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 CYB5R2Q6BCY4 276 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 OR10K2Q6IF99 312 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 DACT3Q96B18 629 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 ISOC1Q96CN7 298 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 MSI2Q96DH6 328 aaKnown RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 SELENOIQ9C0D9 397 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 LPAR5Q9H1C0 372 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 DCSTAMPQ9H295 470 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 NDUFA13Q9P0J0 144 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 ABRACLQ9P1F3 81 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 RCC2Q9P258 522 aaKnown RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 SLC25A10Q9UBX3 287 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-219ENST00000555323 OR5V1Q9UGF6 321 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 RAB22AQ9UL26 194 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 ITPR3Q14573 2671 aa10.52□□□□□ -0.73
SYNE2-219ENST00000555323 TEX15Q9BXT5 2789 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 TRAV24A0A0B4J272 114 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 SMIM31A0A1B0GVY4 71 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 SMAD7O15105 426 aaKnown RBP10.51□□□□□ -0.73
SYNE2-219ENST00000555323 PHF1O43189 567 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-219ENST00000555323 MPIG6BO95866 241 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 GLAP06280 429 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 MSMBP08118 114 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 ZNF44P15621 663 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 ERP29P30040 261 aaKnown RBP10.51□□□□□ -0.73
SYNE2-219ENST00000555323 RORCP51449 518 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 SNU13P55769 128 aaKnown RBP10.51□□□□□ -0.73
SYNE2-219ENST00000555323 PAX5Q02548 391 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 KRTAP1-1Q07627 177 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 DYNC1I2Q13409 638 aaKnown RBP10.51□□□□□ -0.73
SYNE2-219ENST00000555323 IKZF1Q13422 519 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 PDCD1Q15116 288 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 FAM189A2Q15884 450 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 IDNKQ5T6J7 187 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 CD276Q5ZPR3 534 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 SIGIRRQ6IA17 410 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 OR8H2Q8N162 312 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 LY6G5BQ8NDX9 201 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 C8orf46Q8TAG6 207 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 PPP1R35Q8TAP8 253 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 NDNFQ8TB73 568 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 FAM46BQ96A09 425 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 KCTD12Q96CX2 325 aaKnown RBP10.51□□□□□ -0.73
SYNE2-219ENST00000555323 URM1Q9BTM9 101 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms