RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 OR10A7Q8NGE5 316 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 TOX2Q96NM4 488 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 RECKO95980 971 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 SRFP11831 508 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 PYCR3Q53H96 274 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 DNLZQ5SXM8 178 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 SPANXN1Q5VSR9 72 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF784Q8NCA9 323 aaPredicted RBP6.15□□□□□ -1.43
SYNE2-216ENST00000555002 FSCN3Q9NQT6 498 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 THADAQ6YHU6 1953 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 TNCP24821 2201 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 M0R143 59 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 COMPP49747 757 aaPredicted RBP6.15□□□□□ -1.43
SYNE2-216ENST00000555002 OR10D4PQ8NGN7 298 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 OR4C13Q8NGP0 309 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 GABRG3Q99928 467 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 ANKRD36A6QL64 1941 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 LMX1BO60663 402 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 TSPAN13O95857 204 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 RAF1P04049 648 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 PTGFRP43088 359 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 TIAL1Q01085 375 aaKnown RBP eCLIP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ELOBQ15370 118 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF441Q8N8Z8 693 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 OR13F1Q8NGS4 319 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ORAI1Q96D31 301 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 LOC107984156A0A0G2JMH3 177 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 WNT1P04628 370 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 HOXC4P09017 264 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 GSCP56915 257 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SAXO2Q658L1 398 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ARL17AQ8IVW1 177 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 OR2D3Q8NGH3 330 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 LMO3Q8TAP4 145 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ASB13Q8WXK3 278 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SOSTQ9BQB4 213 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 PHF3Q92576 2039 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 CACNA1HO95180 2353 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 TRIP6Q15654 476 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 BAK1Q16611 211 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 PABPC1L2AQ5JQF8 200 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 OTUD1Q5VV17 481 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 FAM71E1Q6IPT2 247 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 MS4A6EQ96DS6 147 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 CXXC4Q9H2H0 198 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 PSMB11A5LHX3 300 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 EML2O95834 649 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 RPS19P39019 145 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 EGR3Q06889 387 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ARIH2OSQ8N7S6 290 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 JAM3Q9BX67 310 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 GABRB1P18505 474 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 B3GNT9Q6UX72 402 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 BPIFA4PQ86YQ2 179 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 OR4S2Q8NH73 311 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 GNRHR2Q96P88 292 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SIGLEC11Q96RL6 698 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 CES1P1Q9UKY3 287 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 DOCK2Q92608 1830 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 CDRT15L2A8MXV6 281 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 VDAC1P21796 283 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 GNG3P63215 75 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 C3AR1Q16581 482 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SNX22Q96L94 193 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 DUX5Q96PT3 197 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ATG101Q9BSB4 218 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 TIAM2Q8IVF5 1701 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 NMUP48645 174 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SUCLG1P53597 346 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 CTU2Q2VPK5 515 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ARHGAP5-AS1Q96IT6 56 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 DAPP1Q9UN19 280 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 HDGFL3Q9Y3E1 203 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 APCSP02743 223 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 C6orf201Q7Z4U5 140 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 METTL26Q96S19 204 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 DOK1Q99704 481 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SHPRHQ149N8 1683 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 CORTO00230 105 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 GUSBP11Q6P575 273 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 DND1Q8IYX4 353 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 SLC39A13Q96H72 371 aa6.14□□□□□ -1.43
SYNE2-216ENST00000555002 ISG20L2Q9H9L3 353 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 TBL2Q9Y4P3 447 aaKnown RBP6.14□□□□□ -1.43
SYNE2-216ENST00000555002 PF4P02776 101 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 BTG1P62324 171 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 IL11RAQ14626 422 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM251Q8N6I4 163 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TCTEX1D1Q8N7M0 179 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 OR5C1Q8NGR4 320 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 OR13C6PQ8NH95 151 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 RHOXF1Q8NHV9 184 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 PHYHIPQ92561 330 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 SDF2Q99470 211 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TEAD3Q99594 435 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 ELOVL1Q9BW60 279 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 LRP12Q9Y561 859 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 METAP1P53582 386 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 CLDN18P56856 261 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms