RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 SS18L1O75177 396 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 SLC2A1P11166 492 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 NAT2P11245 290 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 FPR2P25090 351 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OR3A4PP47883 348 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 CYCSP99999 105 aaKnown RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 EXOSC2Q13868 293 aaKnown RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 RNPS1Q15287 305 aaKnown RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 KISS1Q15726 138 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 ESCO2Q56NI9 601 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 RFPL4BQ6ZWI9 263 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 DPPA2Q7Z7J5 298 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OR8H3Q8N146 312 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 FAM89BQ8N5H3 189 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OR13C8Q8NGS7 320 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OR4K15Q8NH41 348 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OR1F12Q8NHA8 337 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 ABHD3Q8WU67 409 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 DVL3Q92997 716 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 C1orf147Q96MC9 270 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 FOXB1Q99853 325 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 GAL3ST1Q99999 423 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OCSTAMPQ9BR26 566 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 PDCD10Q9BUL8 212 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 DPCDQ9BVM2 203 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-216ENST00000554975 SELENOIQ9C0D9 397 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 FXYD6Q9H0Q3 95 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 OPA3Q9H6K4 179 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 HEXA-AS1Q9H8Q6 139 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 GLRX2Q9NS18 164 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 PARPBPQ9NWS1 579 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 AUP1Q9Y679 476 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 MCRIP1C9JLW8 97 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 F5H5K5 113 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 TPD52L2O43399 206 aaKnown RBP9.52□□□□□ -0.89
SHMT2-216ENST00000554975 SYNGR3O43761 229 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 OR2F2O95006 317 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 DUS4LO95620 317 aaKnown RBP9.52□□□□□ -0.89
SHMT2-216ENST00000554975 COX5BP10606 129 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 MGMTP16455 207 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 ZNF16P17020 682 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-216ENST00000554975 AMY2BP19961 511 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 HRH1P35367 487 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 PTGFRP43088 359 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 HTR5AP47898 357 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 OR2F1Q13607 317 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 GUSBP1Q15486 140 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 TMEM65Q6PI78 240 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.52□□□□□ -0.89
SHMT2-216ENST00000554975 PEG10Q86TG7 708 aaKnown RBP9.52□□□□□ -0.89
SHMT2-216ENST00000554975 SLC51BQ86UW2 128 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 CCDC28AQ8IWP9 274 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 TUSC5Q8IXB3 177 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 OR52B4Q8NGK2 314 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 SCARB1Q8WTV0 552 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 MITD1Q8WV92 249 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 MRPS24Q96EL2 167 aaKnown RBP9.52□□□□□ -0.89
SHMT2-216ENST00000554975 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 SLC6A7Q99884 636 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 MED9Q9NWA0 146 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 TMEM160Q9NX00 188 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 PIGLQ9Y2B2 252 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 TIMM10BQ9Y5J6 103 aa9.52□□□□□ -0.89
SHMT2-216ENST00000554975 PKD1L1Q8TDX9 2849 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 ARPC5O15511 151 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 PET100P0DJ07 73 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 SLC25A4P12235 298 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 ZBTB25P24278 435 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 OR3A3P47888 321 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 OR3A2P47893 321 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 SLC22A6Q4U2R8 563 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 ALKBH2Q6NS38 261 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 BEND4Q6ZU67 534 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 HOGA1Q86XE5 327 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 LRRC18Q8N456 261 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 ZIC4Q8N9L1 334 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 OR51T1Q8NGJ9 327 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 COQ8AQ8NI60 647 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 FBXW5Q969U6 566 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-216ENST00000554975 REEP6Q96HR9 211 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 ALKBH3Q96Q83 286 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-216ENST00000554975 CHST6Q9GZX3 395 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 METTL9Q9H1A3 318 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 CRLF2Q9HC73 371 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 PLSCR4Q9NRQ2 329 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 IL36GQ9NZH8 169 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 SLC7A11Q9UPY5 501 aa9.51□□□□□ -0.89
SHMT2-216ENST00000554975 RPS10-NUDT3A0A1W2PQS6 291 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 KANTRA0A1W2PQU2 76 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 ZNF587BE7ETH6 402 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 CSTBP04080 98 aaKnown RBP9.5□□□□□ -0.89
SHMT2-216ENST00000554975 GNB3P16520 340 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 FAHP16930 419 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 DTYMKP23919 212 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 H2BFSP57053 126 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 IL13RA1P78552 427 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 NKPD1Q17RQ9 610 aa9.5□□□□□ -0.89
SHMT2-216ENST00000554975 KRTAP27-1Q3LI81 207 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms