RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PTTG1IPP53801 180 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 HIST1H3AP68431 136 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 SQSTM1Q13501 440 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 ACOT6Q3I5F7 207 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-203ENST00000554873 C1orf140Q5VVS0 124 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 MARCH3Q86UD3 253 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 OR14L1PQ8NHC6 308 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 TP53RKQ96S44 253 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 LPAR5Q9H1C0 372 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 RFNGQ9Y644 331 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 RP1P56715 2156 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 B4DGG1 531 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 CTSEP14091 401 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 CEACAM8P31997 349 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-203ENST00000554873 CSNK1A1P48729 337 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 FAM3BP58499 235 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-203ENST00000554873 RANP62826 216 aaKnown RBP13.67□□□□□ -0.22
SYNE3-203ENST00000554873 CLEC2AQ6UVW9 174 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 OR2AJ1Q8NGZ0 328 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
SYNE3-203ENST00000554873 SZT2Q5T011 3432 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 A0A0A6YYD4 124 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 CBR3O75828 277 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 NUDT14O95848 222 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 GALNSP34059 522 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SLC6A8P48029 635 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 CSNK2A1P68400 391 aaPredicted RBP13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SGCBQ16585 318 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 CSNK2A3Q8NEV1 391 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SLC24A4Q8NFF2 622 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 OIT3Q8WWZ8 545 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 B3GAT1Q9P2W7 334 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SLC5A6Q9Y289 635 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 EMC9Q9Y3B6 208 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 R4GMQ9 66 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 CCL25O15444 150 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SMIM15Q7Z3B0 74 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 P4HA3Q7Z4N8 544 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SULF2Q8IWU5 870 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 TMEM37Q8WXS4 190 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SLC35E1Q96K37 410 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 ALKBH3Q96Q83 286 aaPredicted RBP13.66□□□□□ -0.22
SYNE3-203ENST00000554873 HIPK2Q9H2X6 1198 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 TXNIPQ9H3M7 391 aa13.66□□□□□ -0.22
SYNE3-203ENST00000554873 SOCS1O15524 211 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 RAD51DO75771 328 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 TDGF1P13385 188 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 CEACAM1P13688 526 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ECI1P42126 302 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 PRDX4Q13162 271 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ADIPOR1Q96A54 375 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ZNF2Q9BSG1 426 aaPredicted RBP13.65□□□□□ -0.22
SYNE3-203ENST00000554873 TPSD1Q9BZJ3 242 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 COA3Q9Y2R0 106 aaPredicted RBP13.65□□□□□ -0.22
SYNE3-203ENST00000554873 SPTY2D1-AS1A0A0U1RR47 76 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 CRYM-AS1A6NIL9 109 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 SRSF10O75494 262 aaKnown RBP13.65□□□□□ -0.22
SYNE3-203ENST00000554873 SEMA4FO95754 770 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 TUBG1P23258 451 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 FOXK1P85037 733 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 EWSR1Q01844 656 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ARFRP1Q13795 201 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 MAJINQ3KP22 176 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 WDR25Q64LD2 544 aaPredicted RBP13.65□□□□□ -0.22
SYNE3-203ENST00000554873 FBXL14Q8N1E6 418 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 C17orf78Q8N4C9 275 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ORAOV1Q8WV07 137 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ZCCHC14Q8WYQ9 949 aaKnown RBP13.65□□□□□ -0.22
SYNE3-203ENST00000554873 ST6GALNAC5Q9BVH7 336 aa13.65□□□□□ -0.22
SYNE3-203ENST00000554873 FAM221AA4D161 298 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 FRG2CA6NGY1 282 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 ST8SIA3O43173 380 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 DXOO77932 396 aaKnown RBP13.64□□□□□ -0.23
SYNE3-203ENST00000554873 IGHV4-34P06331 123 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 CD55P08174 381 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 TMEM225BP0DP42 221 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 SFTPDP35247 375 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 WNT5AP41221 380 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 ASCL1P50553 236 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 SNU13P55769 128 aaKnown RBP13.64□□□□□ -0.23
SYNE3-203ENST00000554873 GNB2P62879 340 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 ZP2Q05996 745 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 ACTL10Q5JWF8 245 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 OR52N5Q8NH56 324 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 MS4A10Q96PG2 267 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 G6PC2Q9NQR9 355 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 IFNL4K9M1U5 179 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 CTSDP07339 412 aaPredicted RBP13.64□□□□□ -0.23
SYNE3-203ENST00000554873 MMP9P14780 707 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 ATP6V1FQ16864 119 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 FUT9Q9Y231 359 aa13.64□□□□□ -0.23
SYNE3-203ENST00000554873 SPTBN5Q9NRC6 3674 aaKnown RBP13.64□□□□□ -0.23
SYNE3-203ENST00000554873 MT-ATP6P00846 226 aa13.63□□□□□ -0.23
SYNE3-203ENST00000554873 GP1BBP13224 206 aa13.63□□□□□ -0.23
SYNE3-203ENST00000554873 CALHM2Q9HA72 323 aa13.63□□□□□ -0.23
SYNE3-203ENST00000554873 LOC101059948A0A1B0GTJ6 334 aa13.63□□□□□ -0.23
SYNE3-203ENST00000554873 NPIPB7O75200 414 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms