RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SPICQ8N5J4 248 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF555Q8NEP9 628 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 OR4K17Q8NGC6 315 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 OR5H2Q8NGV7 314 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 C2orf15Q8WU43 125 aaKnown RBP1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SERPINB11Q96P15 392 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 PEBP4Q96S96 227 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 CYTH2Q99418 400 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 APOL4Q9BPW4 351 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SHANK2-AS3Q9BTD1 123 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 THTPAQ9BU02 230 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 ANGPTL4Q9BY76 406 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 API5Q9BZZ5 524 aaKnown RBP1.66□□□□□ -2.14
SCFD1-213ENST00000554776 WDR55Q9H6Y2 383 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-213ENST00000554776 DIABLOQ9NR28 239 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 NRBP2Q9NSY0 501 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 CHMP5Q9NZZ3 219 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 TAC3Q9UHF0 121 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 CFAP45Q9UL16 551 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SLC22A14Q9Y267 594 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SLC22A7Q9Y694 548 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 VWA8A3KMH1 1905 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 COL1A2P08123 1366 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 ERICH2A1L162 156 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 C9JQL5 133 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 SMLR1H3BR10 107 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 M0QXV9 152 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 GYG2O15488 501 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 TRGV3P03979 118 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 GP1BAP07359 652 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 SOD3P08294 240 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 SLC35E2BP0CK96 405 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 GCLMP48507 274 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 DYNLL1P63167 89 aaKnown RBP1.65□□□□□ -2.15
SCFD1-213ENST00000554776 RAB31Q13636 194 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 BSXQ3C1V8 233 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 CEACAM21Q3KPI0 293 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 ATP6AP1LQ52LC2 224 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 OR10J3Q5JRS4 329 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 TMEM69Q5SWH9 247 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 NXNL2Q5VZ03 156 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 SPINT4Q6UDR6 99 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 TMEM25Q86YD3 366 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 GATD1Q8NB37 220 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 ZNF680Q8NEM1 530 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 SLC26A10Q8NG04 563 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 ACTL9Q8TC94 416 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 ZNF721Q8TF20 911 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 TWIST2Q8WVJ9 160 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 PGLYRP3Q96LB9 341 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 YPEL4Q96NS1 127 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 TAPBPLQ9BX59 468 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 LHX5Q9H2C1 402 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 MFSD1Q9H3U5 465 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 METTL17Q9H7H0 456 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-213ENST00000554776 RDH14Q9HBH5 336 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 FAM60AQ9NP50 221 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 MS4A12Q9NXJ0 267 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 BTRCQ9Y297 605 aa1.65□□□□□ -2.15
SCFD1-213ENST00000554776 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.65□□□□□ -2.15
SCFD1-213ENST00000554776 SHANK1Q9Y566 2161 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 TRAV8-3A0A0A6YYJ7 113 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 UPK2O00526 184 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 PLPP3O14495 311 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 NEMFO60524 1076 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 SNAP29O95721 258 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 IGLV3-19P01714 112 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 SNRPAP09012 282 aaKnown RBP1.64□□□□□ -2.15
SCFD1-213ENST00000554776 SPNP16150 400 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 PRTN3P24158 256 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 HLA-DMAP28067 261 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 TSPOP30536 169 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 UGT2B10P36537 528 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 NUDT2P50583 147 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 RPS11P62280 158 aaKnown RBP eCLIP1.64□□□□□ -2.15
SCFD1-213ENST00000554776 HBG1P69891 147 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 HBG2P69892 147 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 CD164Q04900 197 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 PRDX1Q06830 199 aaKnown RBP1.64□□□□□ -2.15
SCFD1-213ENST00000554776 BAXQ07812 192 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 TRDNQ13061 729 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 FLOT2Q14254 428 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 TTMPQ5BVD1 217 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 CLEC12AQ5QGZ9 265 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 FAM104BQ5XKR9 115 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 ELP2Q6IA86 826 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 USP50Q70EL3 339 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-213ENST00000554776 BOD1L2Q8IYS8 172 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 OR4C13Q8NGP0 309 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 OR8S1Q8NH09 359 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 GTF2H4Q92759 462 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 BIRC8Q96P09 236 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 C1orf50Q9BV19 199 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 HMGXB4Q9UGU5 601 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 ABCB11O95342 1321 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 NRCAMQ92823 1304 aa1.64□□□□□ -2.15
SCFD1-213ENST00000554776 IGKV1OR2-108A0A075B7D4 117 aa1.63□□□□□ -2.15
SCFD1-213ENST00000554776 GOLGA8IPA6NC78 632 aa1.63□□□□□ -2.15
SCFD1-213ENST00000554776 PGPA6NDG6 321 aa1.63□□□□□ -2.15
SCFD1-213ENST00000554776 OR6C70A6NIJ9 312 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms