RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 IL24Q13007 206 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 UBE2V2Q15819 145 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 TRIM16LQ309B1 348 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 UTS2BQ765I0 119 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 TPRA1Q86W33 373 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 CALHM1Q8IU99 346 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 LYSMD2Q8IV50 215 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 CMTM4Q8IZR5 234 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 LY6G5BQ8NDX9 201 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 TRMT10AQ8TBZ6 339 aaKnown RBP10.78□□□□□ -0.68
SHMT2-211ENST00000554310 SMIM19Q96E16 107 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF48Q96MX3 618 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-211ENST00000554310 CNTD2Q9H8S5 307 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 HES4Q9HCC6 221 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 FRRS1LQ9P0K9 344 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 HHLA2Q9UM44 414 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 TRBV23-1A0A0A0MS06 115 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 FAM230AA0A1W2PPH8 454 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 CLDN34H7C241 214 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 RGS5O15539 181 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 NXPH2O95156 264 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF20P17024 532 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 ARF6P62330 175 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 BAMBIQ13145 260 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 MZT2AQ6P582 158 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 BRD3OSQ6XYD6 125 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 LAX1Q8IWV1 398 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 RDH10Q8IZV5 341 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 DNAAF1Q8NEP3 725 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 TMEM185AQ8NFB2 350 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 NPRL2Q8WTW4 380 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 ACOT12Q8WYK0 555 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 H1FXQ92522 213 aaKnown RBP10.77□□□□□ -0.69
SHMT2-211ENST00000554310 PHYHIPQ92561 330 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 BORCS8Q96FH0 119 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF488Q96MN9 340 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 MIXL1Q9H2W2 232 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 ONECUT1Q9UBC0 465 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 V9GYH0 126 aa10.77□□□□□ -0.69
SHMT2-211ENST00000554310 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 OR4C45A6NMZ5 311 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 MAGEB3O15480 346 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 KNG1P01042 644 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 TFF1P04155 84 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 NDUFB7P17568 137 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 PRKACBP22694 351 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 PRTN3P24158 256 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 MYL9P24844 172 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ERVK11-1P61568 191 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ALKBH1Q13686 389 aaKnown RBP10.76□□□□□ -0.69
SHMT2-211ENST00000554310 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-211ENST00000554310 VMO1Q7Z5L0 202 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ANGPTL5Q86XS5 388 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF561Q8N587 486 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF676Q8N7Q3 588 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ZNRF1Q8ND25 227 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 GHSRQ92847 366 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 SPSB1Q96BD6 273 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
SHMT2-211ENST00000554310 ADAT3Q96EY9 351 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-211ENST00000554310 SDHCQ99643 169 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-211ENST00000554310 PRDM13Q9H4Q3 707 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 MAB21L2Q9Y586 359 aa10.76□□□□□ -0.69
SHMT2-211ENST00000554310 IGKV1-27A0A075B6S5 117 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 TRAV1-2A0A0B4J238 106 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 IGHV1-69DA0A0B4J2H0 117 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 TRBV2A0A0J9YWF9 115 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 A0A1W2PQ09 198 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 RFPL4AA6NLU0 287 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 TMEM212A6NML5 194 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 RFPL4AL1F8VTS6 287 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 M0R1W7 72 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 PFDN1O60925 122 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 ARL6IP5O75915 188 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 IGHV1-69P01742 117 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
SHMT2-211ENST00000554310 COMPP49747 757 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-211ENST00000554310 RBP2P50120 134 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 CAPZA1P52907 286 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 ATP1B3P54709 279 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 DEFA1P59665 94 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 DEFA3P59666 94 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 INSL4Q14641 139 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 RUSC1-AS1Q66K80 236 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 UNQ9370/PRO34162Q6UXP9 181 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 C1orf122Q6ZSJ8 110 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 LHFPL2Q6ZUX7 228 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 CEACAM19Q7Z692 300 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 SNX29P2Q8IUI4 249 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 Q8IYB0 196 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 CD177Q8N6Q3 437 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 OR13C3Q8NGS6 347 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 OR10AC1Q8NH08 325 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms