RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ZNF431Q8TF32 576 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 ADAT1Q9BUB4 502 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 OR51I2Q9H344 312 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 MPC1Q9Y5U8 109 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 A0A0G2JNJ9 132 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5H14A6NHG9 310 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 TRAPPC2LH3BP13 241 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 M0R1B8 84 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 PDCD6O75340 191 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 IGLV1-44P01699 117 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 TIMP3P35625 211 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 P2RY6Q15077 328 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 VAX1Q5SQQ9 334 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5AP2Q8NGF4 316 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 TERB2Q8NHR7 220 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 CASTOR1Q8WTX7 329 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 GTF3AQ92664 365 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 MSL2Q9HCI7 577 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 Q9UFV3 132 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 HSF4Q9ULV5 492 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 NPTNQ9Y639 398 aa10.86□□□□□ -0.67
VIPAS39-206ENST00000553888 MLNRO43193 412 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 GRPP07492 148 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 ERP29P30040 261 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 CEACAM8P31997 349 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 TMPRSS3P57727 454 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 FGF12P61328 243 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 IKZF1Q13422 519 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 LIX1LQ8IVB5 337 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 C9orf62Q8N4C0 152 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 ZFAND1Q8TCF1 268 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 PPA2Q9H2U2 334 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 COL6A6A6NMZ7 2263 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 CDIPTO14735 213 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 DNASE1P24855 282 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 MPZP25189 248 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 OVCH2Q7RTZ1 564 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 SLC25A42Q86VD7 318 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 LRP11Q86VZ4 500 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 SCCPDHQ8NBX0 429 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 TMEM230Q96A57 120 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 HS3ST1O14792 307 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 TSC22D2O75157 780 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 TBPP20226 339 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 FUT3P21217 361 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 SSTR2P30874 369 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF154Q13106 437 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 Q6ZR03 302 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF826PQ6ZT77 177 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 MKXQ8IYA7 352 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 SPICQ8N5J4 248 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 MRPS24Q96EL2 167 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 ANXA10Q9UJ72 324 aa10.85□□□□□ -0.67
VIPAS39-206ENST00000553888 IQCF6A8MYZ5 107 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 C1QTNF9BB2RNN3 333 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ATP6V1G2-DDX39BF2Z307 99 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 F5H5P2 479 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 PRRG2O14669 202 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 TFF1P04155 84 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 C1QTNF9P0C862 333 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 GLRA1P23415 457 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ZBTB25P24278 435 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 C11orf88Q6PI97 169 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 C12orf45Q8N5I9 185 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 Q8NFD4 153 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 CCDC107Q8WV48 283 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 RDH5Q92781 318 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 BOD1Q96IK1 185 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ALX4Q9H161 411 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 OBP2BQ9NPH6 170 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 OSGIN2Q9Y236 505 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 NOP16Q9Y3C1 178 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 PIEZO1Q92508 2521 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 CACNA1DQ01668 2161 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 OR5B21A6NL26 309 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 SLC22A5O76082 557 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 TAS2R46P59540 309 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 OR8G1Q15617 311 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 LY6G6FQ5SQ64 297 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ELP2Q6IA86 826 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 VHLLQ6RSH7 139 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 LHFPL1Q86WI0 220 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF573Q86YE8 665 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ZDHHC22Q8N966 263 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 HYLS1Q96M11 299 aa10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 ZNF2Q9BSG1 426 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 RTBDNQ9BSG5 229 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 PURGQ9UJV8 347 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-206ENST00000553888 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 NOS1APO75052 506 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 CRHP06850 196 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 CCKARP32238 428 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 NAAAQ02083 359 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM200AQ86VY9 491 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 ARRDC1Q8N5I2 433 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 RTL8AQ9BWD3 113 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms