RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OR10AC1Q8NH08 325 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 APH1BQ8WW43 257 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 FGGYQ96C11 551 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 AJUBAQ96IF1 538 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 CEP19Q96LK0 163 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 ALG8Q9BVK2 526 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 JAM3Q9BX67 310 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 ISG20L2Q9H9L3 353 aaKnown RBP9.56□□□□□ -0.88
SRP54-203ENST00000553544 AMBNQ9NP70 447 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 ERVK13-1Q9NX77 482 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 OR14J1Q9UGF5 321 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 HHLA2Q9UM44 414 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 EXOSC1Q9Y3B2 195 aaKnown RBP9.56□□□□□ -0.88
SRP54-203ENST00000553544 EFCAB10A6NFE3 127 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 PEX14O75381 377 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 WBP4O75554 376 aaKnown RBP9.55□□□□□ -0.88
SRP54-203ENST00000553544 MT-ND2P03891 347 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 CHRM2P08172 466 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 PIPP12273 146 aaPredicted RBP9.55□□□□□ -0.88
SRP54-203ENST00000553544 IGLL1P15814 213 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 AZGP1P25311 298 aaKnown RBP9.55□□□□□ -0.88
SRP54-203ENST00000553544 GBX2P52951 348 aaPredicted RBP9.55□□□□□ -0.88
SRP54-203ENST00000553544 ATP1B3P54709 279 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 DLX6P56179 175 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 COL10A1Q03692 680 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 CRIP3Q6Q6R5 217 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 OR52I1Q8NGK6 324 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 C17orf50Q8WW18 174 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 SLAMF9Q96A28 289 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 SPSB1Q96BD6 273 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 COMMD4Q9H0A8 199 aa9.55□□□□□ -0.88
SRP54-203ENST00000553544 FGF20Q9NP95 211 aaPredicted RBP9.55□□□□□ -0.88
SRP54-203ENST00000553544 CNOT2Q9NZN8 540 aaKnown RBP9.55□□□□□ -0.88
SRP54-203ENST00000553544 A0A1W2PPH5 198 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 C17orf98A8MV24 154 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 E9PI62 339 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 ZFPL1O95159 310 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 CCL3L1P16619 93 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 ZNF20P17024 532 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 PRKACBP22694 351 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 NPBWR2P48146 333 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 MTCP1P56278 107 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 CD69Q07108 199 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 ZNF273Q14593 569 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 ZNF146Q15072 292 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 SMN1Q16637 294 aaKnown RBP9.54□□□□□ -0.88
SRP54-203ENST00000553544 CCDC58Q4VC31 144 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
SRP54-203ENST00000553544 LHFPL2Q6ZUX7 228 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 RNF144BQ7Z419 303 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 MKXQ8IYA7 352 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 Q8IYB0 196 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 OR4M1Q8NGD0 313 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 TFAP2CQ92754 450 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 CPNE2Q96FN4 548 aaPredicted RBP9.54□□□□□ -0.88
SRP54-203ENST00000553544 OPALINQ96PE5 141 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 NKX3-1Q99801 234 aaPredicted RBP9.54□□□□□ -0.88
SRP54-203ENST00000553544 CITED2Q99967 270 aaPredicted RBP9.54□□□□□ -0.88
SRP54-203ENST00000553544 SERTAD4Q9NUC0 356 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 SCN3BQ9NY72 215 aa9.54□□□□□ -0.88
SRP54-203ENST00000553544 DIMT1Q9UNQ2 313 aaKnown RBP9.54□□□□□ -0.88
SRP54-203ENST00000553544 KIAA2026Q5HYC2 2103 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 IGKV1-12A0A0C4DH73 117 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 TRBV2A0A0J9YWF9 115 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 TMEM82A0PJX8 343 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 TMEM212A6NML5 194 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 MYL12BO14950 172 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 OCM2P0CE71 109 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 OCMP0CE72 109 aaPredicted RBP9.53□□□□□ -0.88
SRP54-203ENST00000553544 LIMS3P0CW19 117 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 LIMS4P0CW20 117 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 BCL3P20749 454 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 TAS2R43P59537 309 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 ERVFRD-1P60508 538 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 PDZK1IP1Q13113 114 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 OR8H2Q8N162 312 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 FAM58AQ8N1B3 248 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 PARP16Q8N5Y8 322 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 ZNF676Q8N7Q3 588 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 ASCC1Q8N9N2 400 aaKnown RBP9.53□□□□□ -0.88
SRP54-203ENST00000553544 OR52N4Q8NGI2 321 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 OR13C3Q8NGS6 347 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 CNIH3Q8TBE1 160 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 TMEM80Q96HE8 168 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 SNX22Q96L94 193 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 Q9H521 79 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 HEXA-AS1Q9H8Q6 139 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 RBFOX1Q9NWB1 397 aaKnown RBP9.53□□□□□ -0.88
SRP54-203ENST00000553544 IL36RNQ9UBH0 155 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 BLOC1S6Q9UL45 172 aa9.53□□□□□ -0.88
SRP54-203ENST00000553544 hCG_1809904A0A1W2PP81 198 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 A0A1W2PPE2 198 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 A0A1W2PR64 198 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 A0A1W2PRV1 198 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 ANGPTL7O43827 346 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 PSPNO60542 156 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 INMTO95050 263 aa9.52□□□□□ -0.89
SRP54-203ENST00000553544 ATP6V1G2O95670 118 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms