RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PAK1IP1Q9NWT1 392 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-204ENST00000553324 TAS2R4Q9NYW5 299 aa12.56□□□□□ -0.4
SHMT2-204ENST00000553324 TPRKBQ9Y3C4 175 aa12.56□□□□□ -0.4
SHMT2-204ENST00000553324 ANK2Q01484 3957 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 TRBV5-5A0A0J9YX44 114 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 A0A0U1RQK1 487 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 TMEM82A0PJX8 343 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 MEIOCA2RUB1 952 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 GPX5O75715 221 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 PAHP00439 452 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 LALBAP00709 142 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 CRYBA1P05813 215 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 CDK1P06493 297 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 DUSP1P28562 367 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 BDKRB2P30411 391 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 RPL15P61313 204 aaKnown RBP12.55□□□□□ -0.4
SHMT2-204ENST00000553324 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 S100A13Q99584 98 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 MND1Q9BWT6 205 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 CDCA4Q9BXL8 241 aa12.55□□□□□ -0.4
SHMT2-204ENST00000553324 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 DEGS1O15121 323 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 PSPNO60542 156 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 OR2H2O95918 312 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 ZNF44P15621 663 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 CELP19835 753 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 MYF6P23409 242 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 ZNF93P35789 620 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-204ENST00000553324 PTGFRP43088 359 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 IER3P46695 156 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 RIPK1Q13546 671 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 RSU1Q15404 277 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 CRIP3Q6Q6R5 217 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 MS4A15Q8N5U1 240 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 C3orf56Q8N813 242 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 Q8NFD4 153 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 OR52N4Q8NGI2 321 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 OR51A2Q8NGJ7 313 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 TNFAIP8L1Q8WVP5 186 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 DYRK2Q92630 601 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 PGLYRP3Q96LB9 341 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 ZNF714Q96N38 554 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 ANKRD60Q9BZ19 345 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 IL36RNQ9UBH0 155 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 LINC00312Q9Y6C7 94 aa12.54□□□□□ -0.4
SHMT2-204ENST00000553324 A0A0G2JK05 382 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-204ENST00000553324 CSN2P05814 226 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 CALCBP10092 127 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 CCL3L1P16619 93 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-204ENST00000553324 SAA4P35542 130 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 SNU13P55769 128 aaKnown RBP12.53□□□□□ -0.4
SHMT2-204ENST00000553324 LGALS4P56470 323 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHMT2-204ENST00000553324 SCN1BQ07699 218 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 KLRD1Q13241 179 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 ZNF273Q14593 569 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 DDI2Q5TDH0 399 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 ASCL4Q6XD76 172 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 CDH26Q8IXH8 852 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 ZFP41Q8N8Y5 198 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 OR4S1Q8NGB4 309 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 CHST6Q9GZX3 395 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 FOXJ3Q9UPW0 622 aa12.53□□□□□ -0.4
SHMT2-204ENST00000553324 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-204ENST00000553324 A0A1B0GUS0 222 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 A0A1W2PRD5 423 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 A0A1W2PRF3 423 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 A0A1W2PRM7 423 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 POM121CA8CG34 1229 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 HAX1O00165 279 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 SIRPB1O00241 398 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 GABRPO00591 440 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
SHMT2-204ENST00000553324 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-204ENST00000553324 TGFBR2P37173 567 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 DLX1P56177 255 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 P2RX3P56373 397 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 GPR50Q13585 617 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 GPR176Q14439 515 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 IL13RA2Q14627 380 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 SPHARQ15513 63 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 HCP5Q6MZN7 132 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 OR5R1Q8NH85 324 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 CHIAQ9BZP6 476 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms