RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 IL13RA2Q14627 380 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 PDCD1Q15116 288 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 SSX1Q16384 188 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 HSD17B12Q53GQ0 312 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 NHLRC3Q5JS37 347 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 FAM27D1Q5T7N8 215 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 C17orf107Q6ZR85 190 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 C9orf139Q6ZV77 190 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 GDPD3Q7L5L3 318 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 CEACAM19Q7Z692 300 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 JAGN1Q8N5M9 183 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 OR51T1Q8NGJ9 327 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 OR5D13Q8NGL4 314 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 TBC1D15Q8TC07 691 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 SNX22Q96L94 193 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 TBX15Q96SF7 602 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 S100A13Q99584 98 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 UQCC2Q9BRT2 126 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 PCGF1Q9BSM1 259 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 METTL9Q9H1A3 318 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 TCF7L1Q9HCS4 588 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 C19orf12Q9NSK7 152 aa9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 SF3B6Q9Y3B4 125 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-209ENST00000552896 A0A1W2PPH5 198 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 TMEM82A0PJX8 343 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 PSPNO60542 156 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 ARL6IP5O75915 188 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 CDRT1O95170 752 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 CSN2P05814 226 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 IGHV4-38-2P0DP08 117 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 CALCBP10092 127 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 GABRR1P24046 479 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 LMO1P25800 156 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 DUSP1P28562 367 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 OR3A1P47881 315 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 RBM11P57052 281 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 BPIFB3P59826 476 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 ARF6P62330 175 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 GPR157Q5UAW9 335 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 METAP1DQ6UB28 335 aaPredicted RBP9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 TMEM91Q6ZNR0 172 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 C1orf122Q6ZSJ8 110 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 VMO1Q7Z5L0 202 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 LINC00596Q86U02 117 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 LRRTM1Q86UE6 522 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 FAM185AQ8N0U4 392 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 BPIFB2Q8N4F0 458 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 PPP1R35Q8TAP8 253 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 NKX3-1Q99801 234 aaPredicted RBP9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 SLITRK2Q9H156 845 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 UNKLQ9H9P5 680 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 PCDHB16Q9NRJ7 776 aa9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 MRPS28Q9Y2Q9 187 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-209ENST00000552896 A0A0A6YYJ9 748 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 SIRPB1O00241 398 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 CCRL2O00421 344 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 MGST3O14880 152 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 HTR3BO95264 441 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 TNFAIP8O95379 198 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 RBP4P02753 201 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 CSTBP04080 98 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 ZNF44P15621 663 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 SRMP19623 302 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 SERPINA2P20848 420 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 GALP22466 123 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 PSMB9P28065 219 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 FABP5Q01469 135 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 BLMHQ13867 455 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 GPR176Q14439 515 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 GRK1Q15835 563 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 PIGYQ3MUY2 71 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 AWAT2Q6E213 333 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 Q6P435 159 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 CD200R1LQ6Q8B3 271 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 USP43Q70EL4 1123 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 OSR2Q8N2R0 312 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 Q8N7P7 452 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 OR4D6Q8NGJ1 314 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 OR10K1Q8NGX5 313 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 MUL1Q969V5 352 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 FOXRED1Q96CU9 486 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 SLC6A7Q99884 636 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 SUCNR1Q9BXA5 334 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 CHST6Q9GZX3 395 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 PPIL3Q9H2H8 161 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 IFT22Q9H7X7 185 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 METTL8Q9H825 291 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 ZNF69Q9UC07 566 aa9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 FBN1P35555 2871 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-209ENST00000552896 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
TRAFD1-209ENST00000552896 SLC33A1O00400 549 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-209ENST00000552896 TCF21O43680 179 aa9.62□□□□□ -0.87
TRAFD1-209ENST00000552896 UBBP0CG47 229 aa9.62□□□□□ -0.87
TRAFD1-209ENST00000552896 GTF2F2P13984 249 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms