RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MS4A2Q01362 244 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 KPNB1Q14974 876 aaKnown RBP11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF146Q15072 292 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 ODF4Q2M2E3 257 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 HLA-DRB5Q30154 266 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 CCDC54Q8NEL0 328 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 TFAP2CQ92754 450 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 ADI1Q9BV57 179 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 PRRG3Q9BZD7 231 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 CHST5Q9GZS9 411 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 RBFOX1Q9NWB1 397 aaKnown RBP11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 TAS2R3Q9NYW6 316 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 IL36RNQ9UBH0 155 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 DYNC2H1Q8NCM8 4307 aaKnown RBP11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 DNAH7Q8WXX0 4024 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 TRBV2A0A0J9YWF9 115 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 FAM172BPA6NC97 362 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 B2RBV5 119 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 SIRPB1O00241 398 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 RPP14O95059 124 aaKnown RBP11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 ZFPL1O95159 310 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 KRT8P05787 483 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 PRKACAP17612 351 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 DUSP1P28562 367 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 ATP1B3P54709 279 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 SLC35B1P78383 322 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 RBM39Q14498 530 aaKnown RBP11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 MEPCEQ7L2J0 689 aaKnown RBP11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 OR4D6Q8NGJ1 314 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 DNAJC9Q8WXX5 260 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 CORO2AQ92828 525 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 ASB9Q96DX5 294 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 P2RX4Q99571 388 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 CLN6Q9NWW5 311 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 H2AFY2Q9P0M6 372 aaPredicted RBP11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 MRM2Q9UI43 246 aaKnown RBP11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 ARL2BPQ9Y2Y0 163 aa11.24□□□□□ -0.61
CHMP1A-210ENST00000551981 SERPINE3A8MV23 424 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 SH2D1BO14796 132 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 ENTPD6O75354 484 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 BCL3P20749 454 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 PTGFRP43088 359 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 NPBWR2P48146 333 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 POU3F4P49335 361 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 RBP2P50120 134 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 SNU13P55769 128 aaKnown RBP11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 THNSL2Q86YJ6 484 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 ADGRG5Q8IZF4 528 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 HS3ST5Q8IZT8 346 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 YIPF7Q8N8F6 280 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 PP6455Q8WZ26 134 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 RPEQ96AT9 228 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 C10orf35Q96D05 121 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 ADGRL4Q9HBW9 690 aa11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 EXOSC4Q9NPD3 245 aaKnown RBP11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
CHMP1A-210ENST00000551981 LY6LH3BQJ8 138 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 H3BSH0 61 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 PRKACGP22612 351 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 CRISP1P54107 249 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 RAB25P57735 213 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 CATSPERDQ86XM0 798 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 DNAAF1Q8NEP3 725 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 TOMM40LQ969M1 308 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 CCDC124Q96CT7 223 aaKnown RBP11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 NOL4LQ96MY1 436 aaPredicted RBP11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 GSTK1Q9Y2Q3 226 aa11.22□□□□□ -0.61
CHMP1A-210ENST00000551981 A0A087X0M5 115 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 A0A1B0GX30 115 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 ODAMA1E959 279 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 FGF16O43320 207 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 PRKYO43930 277 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 OR2H2O95918 312 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 CALCBP10092 127 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 TMEM11P17152 192 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 GDNFP39905 211 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 GLIPR1P48060 266 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 MTCP1P56278 107 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 AESQ08117 197 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 HES1Q14469 280 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 NXNL2Q5VZ03 156 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 FOXRED2Q8IWF2 684 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 OR9G1Q8NH87 305 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 HMG20AQ9NP66 347 aa11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 LSM4Q9Y4Z0 139 aaKnown RBP11.21□□□□□ -0.61
CHMP1A-210ENST00000551981 FAM90A18PA6NE21 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A16PA6NEW6 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A20PA6NIJ5 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A9PA6NNJ1 464 aa11.2□□□□□ -0.62
CHMP1A-210ENST00000551981 FAM90A12PA8MX19 464 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms