RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 APOBEC3DQ96AK3 386 aaPredicted RBP1.43□□□□□ -2.18
SCAF11-215ENST00000551391 VAT1Q99536 393 aa1.43□□□□□ -2.18
SCAF11-215ENST00000551391 PORCNQ9H237 461 aa1.43□□□□□ -2.18
SCAF11-215ENST00000551391 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
SCAF11-215ENST00000551391 FADS3Q9Y5Q0 445 aa1.43□□□□□ -2.18
SCAF11-215ENST00000551391 PLXNB1O43157 2135 aa1.43□□□□□ -2.18
SCAF11-215ENST00000551391 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
SCAF11-215ENST00000551391 NRCAMQ92823 1304 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 VWA8A3KMH1 1905 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 A0A1B0GU33 70 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 TVP23AA6NH52 213 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 F5H5P2 479 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 K7EN84 100 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 RFXANKO14593 260 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 CDS2O95674 445 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 CECR9P0C854 216 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 GZMAP12544 262 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 BGNP21810 368 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 ELK4P28324 431 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 XKP51811 444 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 BNIP2Q12982 314 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 GPR176Q14439 515 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 HNRNPA1L2Q32P51 320 aaKnown RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 LGALSLQ3ZCW2 172 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 FAM58AQ8N1B3 248 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 SYS1Q8N2H4 156 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 Q8NAQ8 132 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 ZNF738Q8NE65 137 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 OR2K2Q8NGT1 345 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 C2orf15Q8WU43 125 aaKnown RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 SLC25A44Q96H78 314 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 TRIB3Q96RU7 358 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 STACQ99469 402 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 UTP23Q9BRU9 249 aaKnown RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 NXF2Q9GZY0 626 aaKnown RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 ANKHQ9HCJ1 492 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 VCX3AQ9NNX9 186 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 ACOT13Q9NPJ3 140 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 SDHAF2Q9NX18 166 aa1.42□□□□□ -2.18
SCAF11-215ENST00000551391 ZNF706Q9Y5V0 76 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 BRD4O60885 1362 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-215ENST00000551391 A0A0B4J2C4 111 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 A0A1B0GXF2 115 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 A0A1W2PNM2 257 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 SOD3P08294 240 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 SCGB1C2P0DMR2 95 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 CGB3P0DN86 165 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 CGB7P0DN87 165 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 CCL23P55773 120 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 DSTNP60981 165 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 VAMP3Q15836 100 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 TMEM241Q24JQ0 296 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 ZNF773Q6PK81 442 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 TPGS1Q6ZTW0 290 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 PID1Q7Z2X4 250 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 LYZL2Q7Z4W2 148 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 FAM19A1Q7Z5A9 133 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 DPPA2Q7Z7J5 298 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 ATPAF2Q8N5M1 289 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 OR2M3Q8NG83 312 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 SCGB1C1Q8TD33 95 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 OR5P3Q8WZ94 311 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 ADTRPQ96IZ2 230 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 HIGD2AQ9BW72 106 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 DNAJC27Q9NZQ0 273 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 RBM12B-AS1Q9P1G2 102 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 C14orf166Q9Y224 244 aaKnown RBP1.41□□□□□ -2.18
SCAF11-215ENST00000551391 SLC22A14Q9Y267 594 aa1.41□□□□□ -2.18
SCAF11-215ENST00000551391 BZW2Q9Y6E2 419 aaKnown RBP1.41□□□□□ -2.18
SCAF11-215ENST00000551391 MIA3Q5JRA6 1907 aa1.4□□□□□ -2.18
SCAF11-215ENST00000551391 DYSFO75923 2080 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 TNIKQ9UKE5 1360 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 PGPA6NDG6 321 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 C3orf84H3BNL1 204 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 PSIP1O75475 530 aaKnown RBP1.4□□□□□ -2.19
SCAF11-215ENST00000551391 ZMPSTE24O75844 475 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 PDYNP01213 254 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 GTF2F2P13984 249 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 PRTN3P24158 256 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 IL12BP29460 328 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 LGALS7P47929 136 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 DNASE1L1P49184 302 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 ZNF83P51522 516 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 CASP8Q14790 479 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 RESP18Q5W5W9 173 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 SLC25A25Q6KCM7 469 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 CYHR1Q6ZMK1 362 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 GALNT10Q86SR1 603 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 LYPD6Q86Y78 171 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 ASCC1Q8N9N2 400 aaKnown RBP1.4□□□□□ -2.19
SCAF11-215ENST00000551391 OR52K1Q8NGK4 314 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 OR6K3Q8NGY3 331 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 LGALS14Q8TCE9 139 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 BLNKQ8WV28 456 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 CCL17Q92583 94 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 OLFM3Q96PB7 478 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 GABARAPL1Q9H0R8 117 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 DIABLOQ9NR28 239 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 STMN3Q9NZ72 180 aa1.4□□□□□ -2.19
SCAF11-215ENST00000551391 ATRNO75882 1429 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms