RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	MRPL22	Q9NWU5	206 aa	Known RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	B9D1	Q9UPM9	204 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SLC22A13	Q9Y226	551 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	FAT1	Q14517	4588 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SMIM23	A6NLE4	172 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	EFCAB9	A8MZ26	197 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TOR1A	O14656	332 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	NDUFB8	O95169	186 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SHBG	P04278	402 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	HSPB1	P04792	205 aa	Known RBP	4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ANXA2	P07355	339 aa	Known RBP	4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	LGALS1	P09382	135 aa	Known RBP	4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CDK2	P24941	298 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	GPR4	P46093	362 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CRYBA2	P53672	197 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	VSNL1	P62760	191 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IFFO1	Q0D2I5	559 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	DEFB135	Q30KP9	77 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	PGM2L1	Q6PCE3	622 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260		Q6ZRM9	215 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TRAPPC6B	Q86SZ2	158 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RTN4RL2	Q86UN3	420 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ZDHHC21	Q8IVQ6	265 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	NRM	Q8IXM6	262 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	POC1A	Q8NBT0	407 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CSNK2A3	Q8NEV1	391 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OR52N4	Q8NGI2	321 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ZNF671	Q8TAW3	534 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	C2CD4C	Q8TF44	421 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	LEAP2	Q969E1	77 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RPE	Q96AT9	228 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	LRGUK	Q96M69	825 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	COPS4	Q9BT78	406 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RABEP2	Q9H5N1	569 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	PLSCR3	Q9NRY6	295 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CENPM	Q9NSP4	180 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	LIN7C	Q9NUP9	197 aa	Known RBP	4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ETAA1	Q9NY74	926 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RASL12	Q9NYN1	266 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	VAPA	Q9P0L0	249 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	HAO1	Q9UJM8	370 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	MPC1	Q9Y5U8	109 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IER3IP1	Q9Y5U9	82 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	LINC00312	Q9Y6C7	94 aa		4.39	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IGLV2-18	A0A075B6J9	118 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	hADV38S2	A0JD32	116 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TVP23A	A6NH52	213 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ZNF785	A8K8V0	405 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OOSP1	A8MZH6	123 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SDHD	O14521	159 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RGS16	O15492	202 aa	Predicted RBP	4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SPRY2	O43597	315 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SOX15	O60248	233 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SPAG7	O75391	227 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	NXPH2	O95156	264 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	HLA-DQA2	P01906	255 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SLPI	P03973	132 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CSN3	P07498	182 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	BPGM	P07738	259 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CLEC2L	P0C7M8	214 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SLC2A2	P11168	524 aa	Predicted RBP	4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CTRB1	P17538	263 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CD34	P28906	385 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CX3CR1	P49238	355 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	F2RL1	P55085	397 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	MEF2C	Q06413	473 aa	Predicted RBP	4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CTRB2	Q6GPI1	263 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	LCN12	Q6JVE5	192 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TBPL2	Q6SJ96	375 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	FAM57B	Q71RH2	274 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	DCXR	Q7Z4W1	244 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TIGD4	Q8IY51	512 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OR8H2	Q8N162	312 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260		Q8N6K4	173 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CLRN3	Q8NCR9	226 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IFT22	Q9H7X7	185 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	PNPO	Q9NVS9	261 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	DNAJC27	Q9NZQ0	273 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RHCG	Q9UBD6	479 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TMA7	Q9Y2S6	64 aa	Known RBP	4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SH3GLB1	Q9Y371	365 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SELENOK	Q9Y6D0	94 aa		4.38	□□□□□ -1.71
RACGAP1-223	ENST00000551260	FAM90A10P	A6NDY2	464 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260		F8VVB4	439 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260		F8VWA3	439 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	DLGAP1	O14490	977 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ATP6V0E1	O15342	81 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CST4	P01036	141 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IFNA4	P05014	189 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	NFYB	P25208	207 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CRABP1	P29762	137 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	PYCR1	P32322	319 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	BMI1	P35226	326 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	REG1B	P48304	166 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	POLR2J	P52435	117 aa	Known RBP	4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	PRRX1	P54821	245 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	FXYD6P3	P58550	94 aa		4.37	□□□□□ -1.71
RACGAP1-223	ENST00000551260	GNG3	P63215	75 aa		4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms